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Ran 13 Mar 2017 04:38PM UTC

Files 35

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Committed 13 Mar 2017 03:57PM UTC coverage: 80.926% (+0.04%) from 80.89%

Job # CONDA_PY=36

Build Type

push

travis-ci

Committed by

RNAer

Commit Message

add more data set and jupyter notebooks (#43)

* check for bool in normalization

* check for >0 in normalize

* change heatmap parameter axis to plot_axis since otherwise we get error from axis wrapper

* allow single value for filter_samples

* variable names in wrap functions

* variable names in wrap functions

* add databases in config file and values to list in some functions

* the calour config file

* qiime2 biom table artifact read

* test qiime2 read

* test table for qiime2 read

* fix reorder to work with empty list

* fix analysis to return empty experiment if no significant difference found

* PR fixes

* PR fixes

* update flake8 version requirement

* remove qiime2 unittest until we fixit

* remove qiime2 for travis

* oops

* add moving pictures+alm timeseries analysis

* byebye cahelper.py

* sea urchin experiment analysis, and add references

* remove 0 size experiment test until we fix it

Coverage Stats

2588 of 3198 relevant lines covered (80.93%)

0.81 hits per line

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