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70%
master: %

Ran 24 Jul 2014 09:31PM UTC

Files 56

Run time 25s

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Committed 24 Jul 2014 09:25PM UTC coverage: 70.331% (+0.4%) from 69.922%

Job # 496.1

Build Type

push

travis-ci

Committed by

MauricioCarneiro

Commit Message

VariantReader: fix deallocated memory access

converted string was going out of scope and getting destroyed, but its
internal buffer as returned by c_str() was continuing to be passed into
htslib's bcf_hdr_set_samples(), and eventually getting clobbered by new
memory allocations.

* add tests to for variants with missing genotypes
* rev-up htslib (taking the opportunity to get some bug fixes)

fixes #122

Run Details

723 of 1028 relevant lines covered (70.33%)

53.78 hits per line

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