Ran
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Files
114
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Run time
5s
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README BADGES
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travis-ci
4081 of 5138 relevant lines covered (79.43%)
0.79 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | ...org/bdgenomics/adam/rdd/ReferencePartitioner.scala | 51 + 21 | 7 - 7 | 0 - 6 | 7 - 1 | 0.0 - 116 | |
0.0 | ...adam/rdd/read/recalibration/ObservationTable.scala | 155 + 134 | 39 + 29 | 0 - 6 | 39 + 35 | 0.0 - 3 | |
0.0 | ...s/adam/rdd/read/recalibration/CycleCovariate.scala | 55 - 203 | 13 - 75 | 0 - 36 | 13 - 39 | 0.0 - 56 | |
0.0 | ...s/adam/rdd/read/recalibration/DinucCovariate.scala | 76 + 76 | 22 + 22 | 0 | 22 + 22 | 0.0 | |
0.0 | .../read/recalibration/BaseQualityRecalibration.scala | 131 + 131 | 40 + 40 | 0 | 40 + 40 | 0.0 | |
0.0 | ...cala/org/bdgenomics/adam/models/QualityScore.scala | 90 + 21 | 12 - 15 | 0 - 16 | 12 + 1 | 0.0 - 24 | |
0.0 | ...nomics/adam/rdd/read/recalibration/Covariate.scala | 139 + 139 | 27 + 27 | 0 | 27 + 27 | 0.0 | |
0.0 | ...scala/org/bdgenomics/adam/util/ParquetLogger.scala | 34 + 34 | 2 + 2 | 0 | 2 + 2 | 0.0 | |
0.0 | ...in/scala/org/bdgenomics/adam/models/SnpTable.scala | 103 + 103 | 17 + 17 | 0 | 17 + 17 | 0.0 | |
0.0 | .../bdgenomics/adam/util/ParquetFileTraversable.scala | 85 + 31 | 23 - 2 | 0 - 19 | 23 + 17 | 0.0 - 16 |