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Fix randomization scaling in prepare PEC with multiple PUBs (#3058)

### Summary
Fixes #3057 

### AI/LLM disclosure
- [X] I used the following tool to generate or modify code: IBM BOB

8887 of 10148 relevant lines covered (87.57%)

0.88 hits per line

Source Files on job unit-tests_python3.12-ubuntu-latest - 29773055702.8