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fix #397 flag solver-dirty on reflection mutations (#400)

* fix #397 flag solver-dirty on reflection mutations

Mutating the reflection collection (add, remove, reorder, dict-API
mutations) now flags _SolverDirty.SAMPLE | _SolverDirty.UB whenever
the change touches an entry in reflections.order, so the next
update_solver() re-pushes the current orienting reflections to the
solver.  Previously, solver-side reflection state could remain stale
after Core.add_reflection or set_orientation_reflections; only
hkl_soleil's self-healing calculate_UB hid the gap.

Also tighten the Release Notes guidance in AGENTS.md to insist on
one-line entries.

Agent: OpenCode (claudeopus47)

* docs #397 document calculate_UB / refineLattice self-install contract

Document in SolverBase.calculate_UB and SolverBase.refineLattice
docstrings, and in the how-to-write-a-solver guide, that every
conformant solver implementation must remove-all + add-each-input +
compute + return -- i.e. the orienting reflections (or the lattice-
refinement reflections) are installed by the method itself, not
inherited from prior solver state.  This codifies the contract
described in the #397 discussion.

Also: cover update() iterable-of-pairs and kwargs-only branches
(restores 100% coverage on reflection.py) and remove a side-effect
inside an assert (CodeQL).

Agent: OpenCode (claudeopus47)

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Source Files on job 25689448011.1