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Reducing complexity to 18 (upload schema) (#3331)

Continues #3329 

<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

* **Refactor**
* Improved internal upload validation organization for clearer, more
maintainable checks.

* **Tests**
* Expanded test coverage for upload validation, including new cases for
missing and present fields.

* **Chores**
  * Adjusted linting complexity threshold to a stricter level.
  * Updated benchmarks to measure schema validation behavior.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

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