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chore: switch backend package manager from npm to pnpm (#875)

- Generate pnpm-lock.yaml, remove package-lock.json
- Add pnpm.overrides for ioredis (replaces npm overrides)
- Add pnpm.onlyBuiltDependencies to allow native modules to build
  (bcrypt, sqlite3, esbuild, msgpackr-extract, vue-demi)
- Update all package.json scripts to use pnpm run
- Update Dockerfile and Dockerfile-docs to install pnpm and use it
- Update CI workflows (build, coverage-baseline, publish-client, release)
  to install/use pnpm and hash pnpm-lock.yaml for caching

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