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Fix data inconsistency warnings: Azure Cosmos DB silently drops $or operators (#1013)

* Initial plan

* Fix data inconsistency: remove unsupported $or queries, use _id only

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Add warning logs for chunks missing _id field

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Address PR feedback: avoid logging sensitive data, add filter assertions

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Fix test assertions and add thread_id to all warning logs

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Fix logger.warning calls to use f-strings instead of printf-style args

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Fix orchestrator test fixture for _id-required chunks

Signed-off-by: Alan Jowett <alan.jowett@microsoft.com>

* Fix test fixture to use schema-compliant chunk IDs and remove non-existent chunk_id field

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

---------

Signed-off-by: Alan Jowett <alan.jowett@microsoft.com>
Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>
Co-authored-by: Alan Jowett <alan.jowett@microsoft.com>

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Source Files on job copilot_vectorstore - 21308450853.26