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Fix thread_ids to always use hex _id, never raw message_id strings (#491)

* Fix thread_ids to always use hex _id, never raw message_id strings

* Increase Ollama timeout to 10 minutes (600s) with env var override

* Remove fallbacks to raw message_id strings in thread building (#495)

* Initial plan

* Fix thread_ids to always use hex _id, never raw message_id strings

- Remove fallback to raw message_id strings in thread_builder.py
- Raise KeyError if _id is missing from messages or root messages
- Add test coverage for missing root message scenario
- Update all existing tests to include _id fields for messages

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

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Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Revert unrelated timeout configuration changes from local_llm_summarizer.py (#503)

* Initial plan

* Revert unrelated timeout changes from local_llm_summarizer.py

Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

* Initial plan (#508)

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>

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Co-authored-by: Alan Jowett <alan.jowett@microsoft.com>
Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Alan-Jowett <20480683+Alan-Jowett@users.noreply.github.com>

170 of 249 relevant lines covered (68.27%)

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Source Files on job copilot_archive_fetcher - 20414917316.21