1
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master: 64%

Ran 31 Jul 2016 06:47PM UTC

Files 77

Run time 8s

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Committed 31 Jul 2016 06:32PM UTC coverage: 81.9% (-0.02%) from 81.919%

Job # 1766.1

Build Type

push

travis-ci

Committed by

Ward9250

Commit Message

Fix fastq quality encoding inference (#243)

* FASTQ parser actually uses given `quality_encoding` argument.

`infer_quality_encoding()` was overwriting the given `encodings`
argument.

* FASTQParser requires exactly one quality encoding

* make `quality_encoding` a required argument to `open(filename, FASTQ)`

* update tests to use new fastq parsing api

Coverage Stats

4647 of 5674 relevant lines covered (81.9%)

569450.86 hits per line

BioJulia / Bio.jl / 1766 / 1
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master: 64%

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BioJulia / Bio.jl / 1766 / 1
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master: 64%

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