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Ran 17 Apr 2025 10:37AM UTC

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Committed 17 Apr 2025 10:36AM UTC coverage: 84.448% (+0.3%) from 84.104%

Job # 14513742974.1

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push

github

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web-flow

Commit Message

Merge pull request #14 from jlab/fix/component-edges

Fix disconnected edges & add paired/stranded reads

Add option to keep reads as paired & stranded 
- add new `ReadsPaired` to store paired reads in
- add `Stranded` to `Reads` to store strandedness
- adapt `filter_kmers` and `filter_kmers_parallel` to respect strandedness of reads

Disconnected edges in graph
- use checked version of `Node::find_edges`
- add `EdgeMult::clean_edges` to correct edge multiplicities for filtered nodes

Coverage Stats

6554 of 7761 relevant lines covered (84.45%)

3876262.65 hits per line

jlab / rust-debruijn / 14513742974 / 1
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master: 88%

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jlab / rust-debruijn / 14513742974 / 1 88% master: 88%

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jlab / rust-debruijn / 14513742974 / 1
88%
master: 88%

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