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Update project to use hatch (#404)

* Update project to use hatch

- Update pre-commit, as black previous version was having issues
- Use recommended structure: https://docs.pytest.org/en/stable/explanation/goodpractices.html
- Update CI
- Add run_tests.sh script

* Fix coverage

* Fix version

* Fix module export

* Fix linting

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Co-authored-by: Uxio Fuentefria <6909403+Uxio0@users.noreply.github.com>

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