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Ran 08 Jan 2024 04:23PM UTC

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Committed 08 Jan 2024 04:22PM UTC coverage: 98.614% (+0.06%) from 98.558%

Job # 7450231601.2

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push

github

Committed by

web-flow

Commit Message

[ENH] Handle multi-column attribute annotations (#264)

* update docstrings and type hints for clarity

* add example with multiple diagnosis cols

* add new example with two diagnosis columns

* update test of categorical value transform

* update get_transformed_values to return a list

* add multi-diagnosis example subject with healthy control value

* update transformed value storing for attributes that expect a single value

* test subject level output with multicolumn diagnosis handling

* add comment and update test data README

* add example with multiple columns about age and sex

* add multicolumn annotation examples to bagel pheno smoke test

* add example 20 to README

* remove addressed TODOs

* add and test warning for multiple age/sex columns

Run Details

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Source Files on job run-3.9 - 7450231601.2

neurobagel / bagel-cli / 7450231601 / 2 98% main: 98%

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Source Files on job run-3.9 - 7450231601.2

neurobagel / bagel-cli / 7450231601 / 2
98%
main: 98%

README BADGES
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