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angelolab / ark-analysis / 5467348906 / 1
95%
master: 94%

Build:
Build:
LAST BUILD BRANCH: main
DEFAULT BRANCH: master
Ran 05 Jul 2023 06:18PM UTC
Files 234
Run time 15s
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05 Jul 2023 05:45PM UTC coverage: 94.37% (-0.02%) from 94.391%
5467348906.1

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Pixie percentile saving (#1020)

* add channel_percentile_postnorm=0.999 variable

* save quantile data to csv

* fix for clustering an image with no non-zero pixels

* reprocess fovs that have feather file but no quantile data

* set quant_fov_list to empty list if no file exists yet

* fix data frame merging

* save file in pixel_output_dir

* file saved in pixel_mat_data

* test for fovs in quantile_data.csv

* set index name for sample data

* missed verify

* accidental function rename

* load quant data once

* delete quantile data file

* remove channel norm test

* move quant_fov check till after no fov check

* remove natsort import

* trigger build

6648 of 7306 branches covered (90.99%)

Branch coverage included in aggregate %.

20155 of 21096 relevant lines covered (95.54%)

0.96 hits per line

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