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master: 57%

Ran 17 Feb 2023 11:15AM UTC

Files 71

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Committed 17 Feb 2023 11:15AM UTC coverage: 79.698%. First build

Job # 4203046199.1

Build Type

push

github

Committed by Jacques Dainat

Commit Message

fix #325 and add test to use with agat_sp_merge_annotations. Rename function merge_overlap_feature in merge_overlap_loci. Replace _check_overlap_name_diff and _check_identical_isoforms by merge_overlap_feature in agat_sp_fix_longest_ORF. Remove remove_l2_related_feature and test (replaced by remove_l2_and_relatives) Improve check_gene_overlap_at_CDSthenEXON to work at l2 and l1 if no children, and rename it into check_feature_overlap_from_l3_to_l1. Fix error in keep_only_uniq_from_list2 function to merge identical isoform and add merge_ suffix for merged attributes

Run Details

11357 of 14250 relevant lines covered (79.7%)

1731.42 hits per line

NBISweden / AGAT / 4203046199 / 1
80%
master: 57%

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NBISweden / AGAT / 4203046199 / 1
80%
master: 57%

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