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Ran 19 Oct 2022 02:20AM UTC

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Committed 19 Oct 2022 02:20AM UTC coverage: 93.575%. Remained the same

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push

travis-ci-com

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Commit Message

Example Dataset - Notebook 3 (#760)

* nb1 dataset download test fixed. Added new tests

* dataset tests: nb2 support

* dataset works for nb1

* pycodestyle

* nb2: notebook tests fix

* nb2: notebook tests fix part 2

* docs build fix

* removed deprecated dataset test

* moved example dataset into it's own respective file and test file

* moved example dataset into it's own respective file and test file

* added tests for checking if a directory is empty or not

* temporary start_docker.sh adjustments

* nb3 data download tests

* adjusted notebook 2

* dataset auth_token=False

* pycodestyle

* Added dataset for Cell Clustering, tests for the dataset, adjusted paths in notebooks and notebook tests.

* updated a test

* updated docstring

* fiber_segmentation_fix

* removed test which runs through all of the Segment Image Data notebook

* moving correct merged files over to nb3

* cleaning up notebook 3

* fiber fix

* minimal changes from main

* moved pixel_output_dir from 'segmentation' to 'pixie'

* shifted to pixie/*

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angelolab / ark-analysis / 6805 / 1
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angelolab / ark-analysis / 6805 / 1
95%
master: 94%

README BADGES
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