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seung-lab / chunkflow
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DEFAULT BRANCH: master
Repo Added 20 Feb 2019 12:57PM UTC
Files 55
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pending completion
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web-flow
Neuroglancer synapses (#241)

* initial implementation, the synapses in neuroglancer is empty; splitted the neuroglancer code to functions and the code is more modular.

* change the neuroglancer operator parameter from chunk_name to inputs

* fix visualization of segmentation

* shows the synaptic pair with line now

* get the order and resolution information from synapse annotation rather than setting it in code

* not use python native function id as variable name

* do not transpose chunk, and change the dimension directly to match chunk axis

53 of 53 new or added lines in 2 files covered. (100.0%)

1723 of 3612 relevant lines covered (47.7%)

1.43 hits per line

Relevant lines Covered
Build:
Build:
3612 RELEVANT LINES 1723 COVERED LINES
1.43 HITS PER LINE
Source Files on master
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  • List 55
  • Changed 11
  • Source Changed 2
  • Coverage Changed 11
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
1386 master Neuroglancer synapses (#241) * initial implementation, the synapses in neuroglancer is empty; splitted the neuroglancer code to functions and the code is more modular. * change the neuroglancer operator parameter from chunk_name to inputs *... push 02 May 2021 01:07PM UTC web-flow travis-ci pending completion  
1375 master move agglomerate from operator to plugin to remove dependency of waterz. (#239) * move agglomerate from operator to plugin to remove dependency of waterz. * try to evalute segmentation using other packages rather than waterz * moved evaluat... push 22 Apr 2021 02:58PM UTC web-flow travis-ci pending completion  
1357 master update documentation and tutorial (#240) push 17 Apr 2021 01:39PM UTC web-flow travis-ci pending completion  
1352 master Update README.md push 15 Apr 2021 12:22PM UTC web-flow travis-ci pending completion  
1347 master release v1.0.6 push 03 Apr 2021 10:08PM UTC jingpengw travis-ci pending completion  
1346 master update changelog for cutout dvid label plugin push 03 Apr 2021 09:58PM UTC jingpengw travis-ci pending completion  
1345 master Update README.md push 03 Apr 2021 09:56PM UTC web-flow travis-ci pending completion  
1344 master add new operator cutout-dvid-label (#195) * add new operator cutout-dvid-label * make cutout-dvid-label operator work by fixing the condition and adding yield task * add instance option and make it work will our repo * move cutout-dvid-... push 03 Apr 2021 09:54PM UTC web-flow travis-ci pending completion  
1333 master current task index and total task number in global states (#237) * update change log for writing png files with corrdinate * generate aligned bounding box tasks for generate-tasks operator * fix building error * fix building by adding so... push 27 Mar 2021 02:41AM UTC web-flow travis-ci pending completion  
1332 master merge master push 27 Mar 2021 01:56AM UTC jingpengw travis-ci pending completion  
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