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openvax / vaxrank
88%
master: 88%

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LAST BUILD BRANCH: add-gene-name-to-report
DEFAULT BRANCH: master
Repo Added 05 Jan 2018 08:34PM UTC
Files 12
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LAST BUILD ON BRANCH use-new-isovar-api-but-old-effects-logic
branch: use-new-isovar-api-but-old-effects-logic
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  • use-new-isovar-api-but-old-effects-logic
  • add-counts
  • add-igv-locus
  • change-fm-index-path
  • deconstruct-VaxrankCoreLogic
  • fine-grained-outputs-for-gene-groups
  • fix-data-packaging
  • fix-float-display
  • fix-isovar-import
  • fix-max-mutations-in-report
  • fix-read-from-json
  • formatting-cleanup
  • get-genome-without-release-version
  • keep-all-variants
  • limit-isovar-versions
  • main
  • master
  • small-fixes
  • use-auto-genome-install-in-test-script
  • use-isovar-for-all-variant-counts
  • yaml-config

pending completion
630

Pull #186

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remove outdated comment
Pull Request #186: use new Isovar API but keep old logic for determining variant effects

52 of 52 new or added lines in 5 files covered. (100.0%)

740 of 839 relevant lines covered (88.2%)

1.77 hits per line

Relevant lines Covered
Build:
Build:
839 RELEVANT LINES 740 COVERED LINES
1.77 HITS PER LINE
Source Files on use-new-isovar-api-but-old-effects-logic
  • List 0
  • Changed 6
  • Source Changed 5
  • Coverage Changed 5
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
630 use-new-isovar-api-but-old-effects-logic remove outdated comment Pull #186 22 Feb 2020 02:23AM UTC web-flow travis-ci pending completion  
629 use-new-isovar-api-but-old-effects-logic remove outdated comment push 22 Feb 2020 02:13AM UTC iskandr travis-ci pending completion  
627 use-new-isovar-api-but-old-effects-logic use --count-mismatches-after-variant push 22 Feb 2020 02:04AM UTC iskandr travis-ci pending completion  
628 use-new-isovar-api-but-old-effects-logic use --count-mismatches-after-variant Pull #186 22 Feb 2020 02:04AM UTC web-flow travis-ci pending completion  
626 use-new-isovar-api-but-old-effects-logic use newer pysam Pull #186 21 Feb 2020 08:15PM UTC web-flow travis-ci pending completion  
625 use-new-isovar-api-but-old-effects-logic use newer pysam push 21 Feb 2020 08:04PM UTC iskandr travis-ci pending completion  
623 use-new-isovar-api-but-old-effects-logic removed redundant constructor arg push 21 Feb 2020 07:56PM UTC iskandr travis-ci pending completion  
624 use-new-isovar-api-but-old-effects-logic removed redundant constructor arg Pull #186 21 Feb 2020 07:55PM UTC web-flow travis-ci pending completion  
619 use-new-isovar-api-but-old-effects-logic boolean not int push 21 Feb 2020 07:02PM UTC iskandr travis-ci pending completion  
618 use-new-isovar-api-but-old-effects-logic making VaxrankResults work with isovar results Pull #186 21 Feb 2020 06:54PM UTC web-flow travis-ci pending completion  
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