openvax / vaxrank
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Merge pull request #191 from openvax/use-isovar-for-all-variant-counts

Use Isovar for all variant counts, change Python versions in tests to 3.6 and 3.7

17 of 17 new or added lines in 3 files covered. (100.0%)

732 of 832 relevant lines covered (87.98%)

1.76 hits per line

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832 RELEVANT LINES 732 COVERED LINES
1.76 HITS PER LINE
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
649 master Merge pull request #191 from openvax/use-isovar-for-all-variant-counts Use Isovar for all variant counts, change Python versions in tests to 3.6 and 3.7 push web-flow travis-ci pending completion  
631 master Merge pull request #186 from openvax/use-new-isovar-api-but-old-effects-logic use new Isovar API but keep old logic for determining variant effects push web-flow travis-ci pending completion  
598 master Merge pull request #185 from openvax/deconstruct-VaxrankCoreLogic Split VaxrankCoreLogic into smaller stateless functions push web-flow travis-ci pending completion  
582 master Merge pull request #184 from openvax/small-fixes Removed namedtuple, other small changes in preparation for rewrite push web-flow travis-ci pending completion  
529 master Merge pull request #177 from openvax/limit-isovar-versions broader version range for isovar, still excluding newest isovar PR push web-flow travis-ci pending completion  
525 master Merge pull request #176 from openvax/limit-isovar-versions Don't use the new Isovar version when it's merged push web-flow travis-ci pending completion  
519 master Merge pull request #175 from openvax/use-auto-genome-install-in-test-script Add --download-reference-genome-data arg to Vaxrank test run script. push web-flow travis-ci pending completion  
516 master creating range of desirable GRAVY scores push iskandr travis-ci pending completion  
515 master added --version to Vaxrank CLI push iskandr travis-ci pending completion  
514 master new manufacturability criteria which minimizes cysteines and keeps overall hydrophobicity under 2.5 and C-term hydrophobicity under 1.5, also added rounding to epitope scores to minimize impact of small floating point errors push iskandr travis-ci pending completion  
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