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hammerlab / vaxrank
90%
master: 86%

Build:
Build:
LAST BUILD BRANCH: update-paper
DEFAULT BRANCH: master
Repo Added 16 Sep 2016 01:18AM UTC
Files 8
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LAST BUILD ON BRANCH minimal-epitope-report
branch: minimal-epitope-report
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  • minimal-epitope-report
  • add-docs-for-rtd
  • add-expression-info-to-xlsx
  • add-neoepitope-report
  • add-package-versions-to-ascii-report
  • add-usage-to-readme
  • bump-version
  • cache-ensembl-downloads
  • debug-jw-data
  • default-vaxrank-mutations-inf
  • doc-edits
  • fix-manufacturer-output-format
  • fix-mhctools-error-catching
  • fix-mhctools-usage
  • fix-no-results
  • fix-ordered-dict-peptides
  • fix-report-no-peptides
  • fix-report-reads-language
  • fix-text-template
  • fix-whee
  • fix-wkhtmltopdf-for-linux
  • isovar-cli-args-for-rna
  • make-log-path-argument
  • manufacturability
  • master
  • optional-internet-runs
  • output-csv-for-jpt
  • output-csv-for-manufacturer
  • refactor-report-ordered-dict
  • remove-todo
  • remove-unused-pdf-code
  • supporting-reference-transcripts-on-MutantProteinFragment
  • test-aa-alt-of-vaxrank-sequence
  • travis-config-updates
  • truncate-excel-spreadsheet-name
  • up-isovar-dependency
  • up-version
  • update-mhctools-version
  • update-paper
  • update-vaxrank
  • vaxrank-add-releasing-md
  • vaxrank-add-wkhtmltopdf-note
  • vaxrank-fix-ascii-template-issue
  • vaxrank-fix-pdf-in-python3
  • vaxrank-fix-requirements
  • vaxrank-format-readme
  • vaxrank-html
  • vaxrank-include-templates-really
  • vaxrank-logger
  • vaxrank-print-to-log
  • vaxrank-really-fix-readme
  • vaxrank-report-printable
  • vaxrank-respect-max-mutations-in-report
  • vaxrank-self-peptide-predictor
  • vaxrank-template-include

pending completion
365

push

travis-ci

julia326
Prettifying ASCII epitope list table, and making PDF epitope list font smaller

2 of 2 new or added lines in 1 file covered. (100.0%)

581 of 643 relevant lines covered (90.36%)

1.81 hits per line

Relevant lines Covered
Build:
Build:
643 RELEVANT LINES 581 COVERED LINES
1.81 HITS PER LINE
Source Files on minimal-epitope-report
  • List 0
  • Changed 2
  • Source Changed 1
  • Coverage Changed 2
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
365 minimal-epitope-report Prettifying ASCII epitope list table, and making PDF epitope list font smaller push 03 Aug 2017 06:09AM UTC julia326 travis-ci pending completion  
363 minimal-epitope-report Fixing ASCII temp file interaction for Python 3. push 01 Aug 2017 08:06PM UTC julia326 travis-ci pending completion  
361 minimal-epitope-report Adding missing astropy dependency (needed for ASCII formatting) push 01 Aug 2017 06:57PM UTC julia326 travis-ci pending completion  
353 minimal-epitope-report Undoing auto-deploy: this should go in as a separate PR. push 31 Jul 2017 08:54PM UTC julia326 travis-ci pending completion  
350 minimal-epitope-report Removing commented-out stuff push 31 Jul 2017 08:30PM UTC julia326 travis-ci pending completion  
348 minimal-epitope-report Small cleanup push 27 Jul 2017 08:27PM UTC julia326 travis-ci pending completion  
346 minimal-epitope-report Catching mhctools errors on WT epitope prediction calls. push 20 Jul 2017 10:50PM UTC julia326 travis-ci pending completion  
344 minimal-epitope-report Upping version, adding auto-deploy to Pypi to Travis config. push 20 Jul 2017 10:04PM UTC julia326 travis-ci pending completion  
343 minimal-epitope-report Changes to ASCII/HTML/PDF reports: - showing WT versions of mutant peptides and their binding strengths - in each vaccine peptide, showing strong binders that don't overlap the mutation - manufacturability and non-mutation-overlapping-epitope sect... push 20 Jul 2017 09:49PM UTC julia326 travis-ci pending completion  
340 minimal-epitope-report Adding a NotImplementedError in the minimal report generation placeholder. push 10 Jul 2017 10:23PM UTC julia326 travis-ci pending completion  
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