googlegenomics / dataflow-java
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Merge pull request #220 from nmousavi/bq-import

Add a pipeline that loads BAM into BigQuery

738 of 3578 relevant lines covered (20.63%)

53.92 hits per line

Relevant lines Covered
3578 RELEVANT LINES 738 COVERED LINES
53.92 HITS PER LINE
Source Files on master
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

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Builds Branch Commit Type Ran Committer Via Coverage
551 master Merge pull request #220 from nmousavi/bq-import Add a pipeline that loads BAM into BigQuery push web-flow travis-ci pending completion  
541 master [maven-release-plugin] prepare for next development iteration push deflaux travis-ci pending completion  
538 master Merge pull request #219 from deflaux/master Update CalculateCoverage integration test. push web-flow travis-ci pending completion  
537 master <a href="https://github.com/googlegenomics/dataflow-java/commit/848f84b70">Update CalculateCoverage integration test. Commit </a><a class="double-link" href="https://github.com/googlegenomics/dataflow-java/commit/56... Pull #219 web-flow travis-ci pending completion  
536 master Merge pull request #218 from deflaux/master Improve performance of CalculateCoverage. push web-flow travis-ci pending completion  
535 master <a href="https://github.com/googlegenomics/dataflow-java/commit/513787455">Turn down verbosity of code coverage run via TravisCI. Change-Id: I</a><a class="double-link" href="https://github.com/googlegenomics/datafl... Pull #218 web-flow travis-ci pending completion  
534 master <a href="https://github.com/googlegenomics/dataflow-java/commit/6a7e2a7c8">Improve parameter description for DeleteVariants pipeline. Also add a simple test script. Change-Id: I</a><a class="double-link" href="http... Pull #218 web-flow travis-ci pending completion  
533 master Merge pull request #217 from deflaux/master Add file list support to CalculateCoverage. push web-flow travis-ci pending completion  
532 master Turn down verbosity of tests run via TravisCI. Change-Id: If46ca5564 Pull #217 web-flow travis-ci pending completion  
531 master Add file list support to CalculateCoverage. Also: * add an integration test for CalculateCoverage * be tolerant of an uncommon ArrayIndexOutOfBoundsException coming from samtools Change-Id: I847c11ab2 Pull #217 web-flow travis-ci pending completion  
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