googlegenomics / dataflow-java

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master: 21%

LAST BUILD ON BRANCH coveragePipeline

branch: coveragePipeline

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• coveragePipeline
• CountReadsCleanup
• CountReadsTest
• CountReadsTest2
• CountReadsTest3
• GCSHelper
• NewSDKVersion
• ReadConverterAttributeFix
• RemoveGCSFilename
• Stringency
• UpdateReadConversions
• automate-bundle
• bump-dataflow
• dloy
• docReadReader
• enforceWindowWithinMerge
• fatjar_09
• fixCountReads
• fix_gcs_auth
• google-genomics-dataflow-v1-0.2
• google-genomics-dataflow-v1-0.3
• google-genomics-dataflow-v1-0.4
• google-genomics-dataflow-v1-0.5
• google-genomics-dataflow-v1-0.6
• google-genomics-dataflow-v1-0.7
• google-genomics-dataflow-v1-0.8
• google-genomics-dataflow-v1beta2-0.1
• google-genomics-dataflow-v1beta2-0.10
• google-genomics-dataflow-v1beta2-0.11
• google-genomics-dataflow-v1beta2-0.12
• google-genomics-dataflow-v1beta2-0.13
• google-genomics-dataflow-v1beta2-0.15
• google-genomics-dataflow-v1beta2-0.16
• google-genomics-dataflow-v1beta2-0.17
• google-genomics-dataflow-v1beta2-0.18
• google-genomics-dataflow-v1beta2-0.2
• google-genomics-dataflow-v1beta2-0.20
• google-genomics-dataflow-v1beta2-0.21
• google-genomics-dataflow-v1beta2-0.3
• google-genomics-dataflow-v1beta2-0.4
• google-genomics-dataflow-v1beta2-0.5
• google-genomics-dataflow-v1beta2-0.6
• google-genomics-dataflow-v1beta2-0.7
• google-genomics-dataflow-v1beta2-0.8
• google-genomics-dataflow-v1beta2-0.9
• makeRead
• master
• movePosRgsMq
• passCallSets
• refactor
• refactor-redo
• refactorSample
• refactor_auth
• regTests
• sharded-bam-writer
• smaller_auth
• smaller_auth_fix
• v2
• variant-annotation
• verifyBamId

Added the CalculateCoverage pipeline/tests.