galantelab / sideRETRO
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master: 97%

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DEFAULT BRANCH: master
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LAST BUILD ON BRANCH vcf
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thiago-miller 
ADD: make_vcf.c: Improve help message

4104 of 4240 relevant lines covered (96.79%)

1515.22 hits per line

Relevant lines Covered
4240 RELEVANT LINES 4104 COVERED LINES
1515.22 HITS PER LINE
Source Files on vcf
Detailed source file information is not available for this build.

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
289 vcf ADD: make_vcf.c: Improve help message push thiago-miller travis-ci pending completion  
285 vcf FIX: utils.c (path_file): Remove extension at last dot push thiago-miller travis-ci pending completion  
281 vcf FIX: retrocopy.c: Same parental in overlapped rtc When two overlapped clusters share the same parental gene - maybe the edge points are reachable, not core points (DBSCAN) - it would be annotated as overlapped parentals. Now it will be annotated ... push Thiago L. A. Miller travis-ci pending completion  
276 vcf REMOVE: genotype.c, merge_call.c: --crossing-reads push thiago-miller travis-ci pending completion  
275 vcf ADD: process_sample.c, merge_call.c: Final messages push thiago-miller travis-ci pending completion  
274 vcf ADD: db.c, genotype.c vcf.c: INFO DP2 Add reference and alternate depth counts to VCF's info push thiago-miller travis-ci pending completion  
273 vcf CHANGE: db.c, genotype.c, vcf.c: Genotype likelihood Implement the genotype estimation by using the likelihood approach as it is defined in Heng Li paper: "A statistical framework for SNP calling, mutation discovery, association mapping and popul... push thiago-miller travis-ci pending completion  
269 vcf Version 0.13.0 push Thiago L. A. Miller travis-ci pending completion  
268 vcf ADD: make_vcf.c: make-vcf command push Thiago L. A. Miller travis-ci pending completion  
267 vcf ADD: genotype.c (genotype): phred_qualit Filter reads crossing insertion point also by phred quality score push Thiago L. A. Miller travis-ci pending completion  
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