crmackay / gobioinfo
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LAST BUILD ON BRANCH new-bayesian-alignment
branch: new-bayesian-alignment
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
22 new-bayesian-alignment traceback, prob calc/test, and alignment representation - fixed traceback so that it is reliable - fixed a bug with forward P(S|L’) probability calculations - added P(L|S) and P(L’|S) calculations and test - added a print_alignment function to pr... push crmackay travis-ci pending completion  
21 new-bayesian-alignment working version with odds-ratios... push crmackay travis-ci pending completion  
20 new-bayesian-alignment completed traceback functionality push crmackay travis-ci pending completion  
19 new-bayesian-alignment updating c implementation - first working prototype version of the algorithm - still missing file io, length checks, threading etc. push crmackay travis-ci pending completion  
18 new-bayesian-alignment semi-working implementation - implemented a whole new dynamic programming algorithm that abandons the edit distance paradigm and the like (NW alignment) in favor of what I think is a novel algorithm that calculates probabilities.. - also implemen... push crmackay travis-ci pending completion  
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