cokelaer / damona
94%
master: 90%

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coverage: 94.182% (-0.4%) from 94.566%
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
33217361414 main test: add integration test suite Tests Registry and CLI with real local data (not mocked). Validates end-to-end behavior: loading registries, searching, suggesting similar names, caching behavior. 15 tests covering: - Registry loading and filter... push cokelaer github
94.18
33179270349 main add trimmomatic 0.39.0 and salmon 1.2.0 push cokelaer github
94.57
32459859479 main chore: ignore the manuscript supporting-analysis tree analysis/ holds the crawls, benchmarks and rebuild campaign backing the manuscript numbers; its HTTP cache alone is ~850 MB. Keep the whole tree out for now. Before submission the code and the... push cokelaer github
94.57
32459012241 main docs: changelog entries for dustmasker and the uninstall suggestions Co-Authored-By: Claude Opus 5 <noreply@anthropic.com> push cokelaer github
94.46
32178313771 main Release subread 2.0.3-1: pinned, fixed runscript; sync build_readme.py subread 2.0.3's micromamba install was unpinned and its %runscript ran featuregffread, a copy-paste leftover with no such binary. 2.0.3-1 pins subread="2.0.3" and execs featur... push cokelaer github
94.97
32171271709 main Resume an orphaned draft instead of re-uploading on publish retry Zenodo's actions/publish call can bounce (502/504) after the upload and metadata steps already succeeded, since publish is the last of four separate requests. Retrying from scratch... push cokelaer github
95.04
32115388160 main more test and doc push cokelaer github
95.03
32113451546 main Drop the 5.3.8 backstory from the bamqc notes The key is now documented on its own terms -- where 0.1.25 comes from -- rather than in contrast with a delisted key nobody will look for. push cokelaer github
95.2
31841288317 main a coupld of fixes and update doc push cokelaer github
95.24
31531938966 main Keep hand-written notes in the generated software READMEs Per-software README.md files are generated from registry.yaml, so anything written into them by hand disappears on the next run of build_readme.py. krona/README.md had already accumulated ... push cokelaer github
95.24
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