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broadinstitute / viral-classify
61%
master: 66%

Build:
Build:
LAST BUILD BRANCH: v2.5.21.1
DEFAULT BRANCH: master
Repo Added 10 Sep 2019 08:19PM UTC
Files 15
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LAST BUILD ON BRANCH v2.5.21.1
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  • bump-core
  • ca-kb_python
  • ct-bump-viral-core-2.3.1
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  • gh-readonly-queue/master/pr-60-80e46082a0cc0a1fcc8108d52290a6e9560acd22
  • gh-readonly-queue/master/pr-62-5e3de17839670b19c7efe34b5c4eae86900afdf3
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  • remove-kaiju-broad-viral
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  • v2.5.16.0
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  • v2.5.20.0
  • v2.5.21.0
  • v2.5.21.1

03 Feb 2026 03:28PM UTC coverage: 60.595%. Remained the same
21636442264

push

github

web-flow
Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral

Disable kaiju to remove broad-viral conda channel dependency

270 of 494 branches covered (54.66%)

Branch coverage included in aggregate %.

1806 of 2932 relevant lines covered (61.6%)

0.62 hits per line

Relevant lines Covered
Build:
Build:
2932 RELEVANT LINES 1806 COVERED LINES
0.62 HITS PER LINE
Source Files on master
  • Tree
  • List 15
  • Changed 0
  • Source Changed 0
  • Coverage Changed 0
Coverage ∆ File Lines Relevant Covered Missed Hits/Line Branch Hits Branch Misses

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
21636442264 v2.5.21.1 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push 03 Feb 2026 03:41PM UTC web-flow github
60.6
21636441430 gh-readonly-queue/master/pr-62-5e3de17839670b19c7efe34b5c4eae86900afdf3 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push 03 Feb 2026 03:41PM UTC web-flow github
60.6
21636344737 v2.5.21.1 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push 03 Feb 2026 03:39PM UTC web-flow github
60.6
21636302551 gh-readonly-queue/master/pr-62-5e3de17839670b19c7efe34b5c4eae86900afdf3 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push 03 Feb 2026 03:38PM UTC web-flow github
60.6
21634520661 remove-kaiju-broad-viral Pass channel overrides to conda create commands CONDA_CHANNEL_STRING only affects mamba install, not conda create. The conda create commands were still using broad-viral from .condarc. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> Pull #62 03 Feb 2026 02:48PM UTC dpark01 github
60.6
21634341250 remove-kaiju-broad-viral Merge a71e96fbb into 5e3de1783 Pull #62 03 Feb 2026 02:43PM UTC web-flow github
60.6
21291338682 ca-kb_python Merge branch 'master' into ca-kb_python Pull #61 23 Jan 2026 03:36PM UTC web-flow github
64.57
21291340017 ca-kb_python Merge 097ea7454 into 6608e2914 Pull #61 23 Jan 2026 03:36PM UTC web-flow github
64.57
21289888454 ca-kb_python Merge 3d237e43e into 6608e2914 Pull #61 23 Jan 2026 02:49PM UTC web-flow github
64.57
20980379058 ca-kb_python Add KMA k-mer alignment tool integration Adds KMA (k-mer alignment) tool wrapper following existing patterns from kraken2 and kb-python for taxonomic classification of reads. Implementation: - classify/kma.py: Tool wrapper class inheriting from ... push 14 Jan 2026 02:55AM UTC carze github
63.51
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