broadinstitute / viral-classify
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master: 66%

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LAST BUILD ON BRANCH v2.5.21.1
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Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral

Disable kaiju to remove broad-viral conda channel dependency

270 of 494 branches covered (54.66%)

Branch coverage included in aggregate %.

1806 of 2932 relevant lines covered (61.6%)

0.62 hits per line

Relevant lines Covered
2932 RELEVANT LINES 1806 COVERED LINES
0.62 HITS PER LINE
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
21636442264 v2.5.21.1 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push web-flow github
60.6
21636441430 gh-readonly-queue/master/pr-62-5e3de17839670b19c7efe34b5c4eae86900afdf3 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push web-flow github
60.6
21636344737 v2.5.21.1 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push web-flow github
60.6
21636302551 gh-readonly-queue/master/pr-62-5e3de17839670b19c7efe34b5c4eae86900afdf3 Merge pull request #62 from broadinstitute/remove-kaiju-broad-viral Disable kaiju to remove broad-viral conda channel dependency push web-flow github
60.6
21634520661 remove-kaiju-broad-viral Pass channel overrides to conda create commands CONDA_CHANNEL_STRING only affects mamba install, not conda create. The conda create commands were still using broad-viral from .condarc. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> Pull #62 dpark01 github
60.6
21634341250 remove-kaiju-broad-viral Merge a71e96fbb into 5e3de1783 Pull #62 web-flow github
60.6
21291338682 ca-kb_python Merge branch 'master' into ca-kb_python Pull #61 web-flow github
64.57
21291340017 ca-kb_python Merge 097ea7454 into 6608e2914 Pull #61 web-flow github
64.57
21289888454 ca-kb_python Merge 3d237e43e into 6608e2914 Pull #61 web-flow github
64.57
20980379058 ca-kb_python Add KMA k-mer alignment tool integration Adds KMA (k-mer alignment) tool wrapper following existing patterns from kraken2 and kb-python for taxonomic classification of reads. Implementation: - classify/kma.py: Tool wrapper class inheriting from ... push carze github
63.51
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