broadinstitute / oncotator

71%

develop: 66%

LAST BUILD ON BRANCH lb_fix_indels_only_onp

branch: lb_fix_indels_only_onp

CHANGE BRANCH

x

Reset

• lb_fix_indels_only_onp
• develop
• issue-210-bigwig-support
• issue-252-biopython-warning
• issue-266-uniprot_match_transcripts
• issue-286
• issue-296-Fix_uniprot_gene_entries
• issue-297-idexed_tsv_missing_overlap_hotfix
• issue-304-docker
• issue-307-VCF_to_MAF_filter_column_option
• issue-313-M2_CLI_support
• issue-314-M2_phasing
• issue-315-flank-not-rendering
• issue-323-AD_split_prepend_conflict
• issue-325-OxoG_changes
• issue-326-OxoG_fix_collapsing
• issue-343-Fix_ExAC_ds
• issue-72-Custom_canonical_list
• issue_211_travis
• lb_212_remove_gaf
• lb_257_fix_coveralls
• lb_264_transcript_ranking_shuffle
• lb_fix_329
• master
• release-1.4
• release-1.5
• release-1.6
• release-1.7
• release-1.8
• release-1.9
• v1.4.0.0
• v1.4.1.0
• v1.5.0.0
• v1.5.2.0
• v1.6.1.0
• v1.7.0.0
• v1.7.1.0
• v1.8.0.0
• v1.9.0.0

Build # 253

Build Type

push

travis-ci

Committed by lbergelson

Commit Message

Fixing OnpCombiner for indels only files
  fixing an additional indel ordering issue
  added a warning for out of order files when running with --infer-onps
  running out of order may fail to combine some onps
  it may also lead to storing large numbers of mutations in memory while waiting to combine them

Run Details

33 of 33 new or added lines in 2 files covered. (100.0%)

13460 of 18923 relevant lines covered (71.13%)

0.71 hits per line