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broadinstitute / oncotator
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DEFAULT BRANCH: develop
Repo Added 06 Aug 2014 07:14PM UTC
Files 188
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LAST BUILD ON BRANCH develop
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  • develop
  • issue-210-bigwig-support
  • issue-252-biopython-warning
  • issue-266-uniprot_match_transcripts
  • issue-286
  • issue-296-Fix_uniprot_gene_entries
  • issue-297-idexed_tsv_missing_overlap_hotfix
  • issue-304-docker
  • issue-307-VCF_to_MAF_filter_column_option
  • issue-313-M2_CLI_support
  • issue-314-M2_phasing
  • issue-315-flank-not-rendering
  • issue-323-AD_split_prepend_conflict
  • issue-325-OxoG_changes
  • issue-326-OxoG_fix_collapsing
  • issue-343-Fix_ExAC_ds
  • issue-72-Custom_canonical_list
  • issue_211_travis
  • lb_212_remove_gaf
  • lb_257_fix_coveralls
  • lb_264_transcript_ranking_shuffle
  • lb_fix_329
  • lb_fix_indels_only_onp
  • master
  • release-1.4
  • release-1.5
  • release-1.6
  • release-1.7
  • release-1.8
  • release-1.9
  • v1.4.0.0
  • v1.4.1.0
  • v1.5.0.0
  • v1.5.2.0
  • v1.6.1.0
  • v1.7.0.0
  • v1.7.1.0
  • v1.8.0.0
  • v1.9.0.0

pending completion
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LeeTL1220
Setting version number

1 of 1 new or added line in 1 file covered. (100.0%)

10816 of 16476 relevant lines covered (65.65%)

0.66 hits per line

Relevant lines Covered
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16476 RELEVANT LINES 10816 COVERED LINES
0.66 HITS PER LINE
Source Files on develop
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
471 develop Setting version number push 15 Apr 2016 06:44PM UTC LeeTL1220 travis-ci pending completion  
467 develop Issue 343 fix ex ac ds (#344) * Changes to accommodate the new pyVCF. Upgrading pysam. Still need to update build scripts. Also, accommodating new missing format field convention (if it is missing, annotate w/ "") * Updates to support new v... push 15 Apr 2016 03:42PM UTC LeeTL1220 travis-ci pending completion  
466 develop Looks like VCF writer does not support ``with`` blocks. Pull #344 15 Apr 2016 02:30PM UTC LeeTL1220 travis-ci pending completion  
461 develop Addressing PR comment regarding pegging versions of packages. Pull #344 12 Apr 2016 01:50PM UTC LeeTL1220 travis-ci pending completion  
460 develop Fixing issue with _io.BytesIO does not have name attribute (!) Pull #344 09 Apr 2016 02:22AM UTC LeeTL1220 travis-ci pending completion  
458 develop Attempting to fix travis (and docker) by eliminating the deprecated distribute package. Pull #344 08 Apr 2016 11:50PM UTC LeeTL1220 travis-ci pending completion  
96 develop Reordering build so that conda environment creation goes first. Pull #214 07 Feb 2016 12:59AM UTC lbergelson travis-ci pending completion  
432 develop Update README Missing ngslib Pull #335 10 Nov 2015 02:13PM UTC raonyguimaraes travis-ci pending completion  
428 develop Merge pull request #330 from broadinstitute/issue-326-OxoG_fix_collapsing Issue 326 oxo g fix collapsing push 16 Jul 2015 02:55PM UTC lbergelson travis-ci pending completion  
427 develop Fixed unit test again Pull #330 16 Jul 2015 02:00AM UTC LeeTL1220 travis-ci pending completion  
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