biocore / q2-chemistree

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travis-ci

Meta update (#57)

* changing import line number

* add functionality to merge multiple ftable and fprints

* update plugin to allow multiple datasets for make hierarchy

* update plugin to allow multiple datasets for make hierarchy

* remove register views wip

* add functionality to merge multiple feature metadata wip

* add feature data return

* adding TSVMoleculeFormat

* register new sematic type and transformer from DataFrame to TSBMolecules

* fixing merge_feature_data runtime errors

* index feature data by MD5 hash

* add test dataset #2

* add regex match to empty fingerprint

* add tests for multiple datasets

* testing feature data return

* adding transformer for TSVmolecules to df and vice versa

* fix flake8 errors, correct table number indexing

* remove unused imports

* rename make hierarchy outputs, fix flake8 errors

* update matching to list, add explicit test case with artifical feature data

* update tutorial to highlight meta analyses using make hierarchy

* update outputs

* update input description

* update qiime version

* adding second csi folder for demo

* preserve order of indeces, convert fp table to numeric - lead to runtime errors

* add harcoded tests on test datasets

* change set match to exact list match

* adding test data

* update make hierarchy meta analyses description

* fix missing whitespace

* fix typo

* adding parameter and output description

* remove obsolete TODO comment

* casting fp list to float

* remove numeric conversion of fps, switch sha256 to md5

94 of 95 branches covered (98.95%)

Branch coverage included in aggregate %.

78 of 78 new or added lines in 6 files covered. (100.0%)

219 of 231 relevant lines covered (94.81%)

0.95 hits per line