bihealth / varfish-annotator

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• chore-common-dot-github-files
• 28-implement-ci
• ee0ab3c98d75f701b961f87f42a85a92ef1d6d46
• main
• 31-add-end-to-end-smoke-test-to-ci-for-annotate-and-annotate-sv
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• 33-add-end-to-end-smoke-test-to-ci-for-annotate-svs
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• 11-output-is-not-gzipped-when-file-extension-is-set-to-gz
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• 18-do-not-write-out-asterisk-allele
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• 22-problem-with-grch38-annotation-exac-and-thousand-genomes-missing
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• 27-add-self-test-to-annotation
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• 36-properly-annotate-hemizygous-variants
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• 42-release-v022
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• 36-fix-hemizygous
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• 14-add-json-column-info-for-additional-annotations
• 41-adjust-output-of-sv-annotation
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• 45-ensure-that-break-end-records-are-written-out-in-paired-fashion
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• 48-release-v023
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• 51-varfish-annotator-self-test-has-wrong-assumptions-about-gnomad_genomes_var
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• 53-do-not-write-out-unaffectedaffectedbackgroundcarriers-into-info-field-for-structural-variants-tsv
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• 56-sanity-check-for-grch37-gnomad-genomes-and-chromosome-y-is-wrong
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• 58-release-v025
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• 61-add-systemend-to-end-tests-for-varfish-annotator
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• 63-increase-test-coverage
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• 67-remove-explicit-support-for-sv2
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• 68-add-explicit-support-for-sv-calling-tools
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• 74-write-out-deldup-from-dragen-cnv-calling-as-svtype=deldup
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• 73-implement-support-for-annotating-depth-of-coverage-and-mapping-quality-for-cnvs
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• 75-implement-support-for-merging-multiple-vcf-files-in-annotate-svs
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• 79-ensure-output-is-always-sorted
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• 85-remove-bnd-with-non-included-target-sequences
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• 84-handle-absent-quality-metrics-for-mt-coming-from-dragen
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• 88-npe-when-annotating-delly2-files
• 90-implement-release-please
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• 91-make-sure-that-we-can-annotate-melt-vcfs
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• 93-exception-in-thread-main-javalangnumberformatexception-for-input-string-2144
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Build # #323

Build Type

push

Committed by holtgrewe

Commit Message

chore: common .github files

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