bihealth / sodar-server

89%

main: 89%

LAST BUILD ON BRANCH 1908-add-cram-support

branch: 1908-add-cram-support

CHANGE BRANCH

x

Reset

• 1908-add-cram-support
• update/coverage
• dev
• fix/ci
• feature/ext-link-config
• main
• refs/tags/v0.12.0
• fix/lock-issues
• refactor/study-render
• refactor/germline-cache
• refs/tags/v0.12.1
• refactor/irods-conns
• feature/render-cache
• upgrade/core-0.12
• feature/archive
• update/igv-genome
• cleanup/0.13.0
• refs/tags/v0.13.0
• docs/api-example
• 1619-add-rest-api-endpoint-to-retrieve-project-irods-file-list
• feature/irods-path-validation
• refs/tags/v0.13.2
• 1631-update-url-patterns-to-use-path
• Display-study-and-assay-plugin-icons
• 1267-enable-landing-zone-updating
• 1588-add-irods-delete-request-management-to-samplesheets-rest-api
• upgrade/core0.13
• fix/file-input
• landingzone-update-view
• 1588-irods-request-management-to-samplesheets-rest-api
• 1267-landing-zone-updating
• cleanup/0.13.3
• refs/tags/v0.13.3
• irods-delete-request-rest-api-views
• fix-docker
• 1639-add-setting-to-disable-study-table-cache-in-development
• 1339-add-davrods-link-to-irods-deletion-request-list-items
• feature/isa-template-req
• 1340-add-batch-acceptingrejecting-for-irods-delete-requests
• refs/tags/v0.13.4
• study-table-cache-setting
• irods-delete-request
• davrods-link-and-irods-batch-accept
• landingzone
• refs/heads/davrods-link-and-irods-batch-accept
• refs/heads/upgrade/core0.13
• landingzones-nothing-to-do-check
• feature/irods-tickets
• path-clipboard-copy-button-landing-zone-irods-collection-list
• 1607-enable-landing-zone-controls-for-superuser-if-zone-is-locked
• 1684-query-for-ui-landing-zone-status-in-batch
• irods-rest-api-configurations-info
• irods-access-tickets-api-views
• landingzone-post-status-update
• landingzones-status-update
• output-irodsadmin-command-results
• update/taskflow-tests
• refactor/taskflow-tests
• docs-irodsbackend
• irods-access-tickets
• 1295-display-irods-file-count-in-sheet-overview-tab
• 1296-add-create-tag-for-sheet-versions
• 1398-create-and-use-constants-for-landing-zone-status-types
• refactor/irods-data-request
• update/docs
• fix/docs
• 1752-crash-in-zonestatusretrieveajaxview-views-from-getlist
• 1757-add-template-boolean
• 1765-fix-docker-build
• 1769-update-nodejs-install
• 1749-update-irods-request-ui-path
• 1661-add-library-name-mgmt
• 1638-cleanup
• 1638-prepare
• refs/tags/v0.14.0
• 1811-upgrade
• 1812-update-igv-genome
• 1592-add-irods4.3-support
• 1310-add-sheet-sync-validation
• 1811-upgrade-werkzeug
• 1831-fix-get-version
• 1826-cleanup
• refs/tags/v0.14.1
• cyberduck
• 1858-fix-legacy-delete-requests
• ms_meta
• 1869-add-zone-assay-shortcuts
• 1882-refactor-zone-coll-queries
• 1888-fix-zone-move-path
• 1458-fix-zone-failed-status-not-set
• 1896-fix-isa-template-slash
• 1903-fix-and-refactor-irods-stats
• 1899-upgrade-sodar-core
• 1906-fix-setaccesstask-exceptions
• 1905-fix-zone-create-crash
• 1904-fix-process-name-handling
• 1912-add-data-request-extra-data
• 1909-fix-finished-zone-lock-status
• 1923-add-igv-omit-glob-pattern
• 1921-fix-germline-family-col-check
• 1861-cleanup
• refs/tags/v0.14.2
• 1938-fix-readme-badges
• 1941-add-checksum-retry
• 1944-upgrade-irods-client
• dynamic_plugin
• 1949-fix-irods-tooltips
• 1948-update-zone-role-modify-lock
• 1955-rollback-python-irodsclient
• 1955-fix-python-client-crash
• 1957-add-update-row-index
• 1958-fix-landing-zone-irods-name-exception
• 1963-add-shortcut-modal-omit-patterns
• 1968-add-row-link-display-override
• 1961-add-template-upload-app
• 1972-upgrade-vue-app-deps
• 1933-cleanup
• refs/tags/v0.15.0
• 1982-fix-generic-plugin
• 1986-upgrade-deps
• 1922-upgrade-sodar-core-fix-ci
• 1922-upgrade-sodar-core
• dev1.0
• 1978-fix-e721
• 1936-update-api-versioning
• 1994-add-api-pagination
• 1951-add-openapi-support
• 1985-cleanup
• refs/tags/v0.15.1
• 1939-add-email-opt-out
• 2001-refactor-tests
• 1653-unify-flow-username
• 2004-fix-docker
• 1815-upgrade-ci-irods
• 2007-upgrade-irods-client
• 2010-update-timeline-constants
• 1980-add-assay-app-tests
• 2016-refactor-get-assay-path
• 1846-refactor-landing-zone-move
• 1885-add-study-plugin-override
• 1999-add-oidc-user-token-auth
• 2023-upgrade-irods-client
• 1847-update-rest-api-lock-errors
• 2023-remove-ci-workaround
• 2032-update-md5-case
• 1959-upgrade-deps
• 2033-upgrade-altamisa
• 2036-update-api-zone-create
• 1959-upgrade-sodar-core-wip

Build # 8082253719

Build Type

push

github

Committed by mikkonie

Commit Message

add cram support (#1908, #1914)

Run Details

11633 of 13071 relevant lines covered (89.0%)

0.89 hits per line