PrincetonUniversity / slurmise

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• bugfix_job_database.iterate_jobs
• chore/defer_slkearn_import
• chore/fix-linting
• copilot/fix-slurmise-record-issue
• dependabot/github_actions/actions/checkout-7
• dependabot/github_actions/all-actions-1cad09eb89
• dependabot/github_actions/all-actions-640176b5ab
• dependabot/github_actions/all-actions-7431cd2480
• dependabot/github_actions/astral-sh/setup-uv-7
• dependabot/uv/all-deps-018e11b5c8
• dependabot/uv/all-deps-13aa9c1c21
• dependabot/uv/all-deps-28c3b11a87
• dependabot/uv/all-deps-31ffd2a734
• dependabot/uv/all-deps-3a713f0124
• dependabot/uv/all-deps-885bcf95ea
• dependabot/uv/all-deps-9a1dd0b99b
• dependabot/uv/all-deps-a4607b1f71
• dependabot/uv/all-deps-a785b9f911
• dependabot/uv/all-deps-bf32c511f3
• dependabot/uv/click-8.5.0
• dependabot/uv/coverage-7.15.4
• dependabot/uv/coverage-7.16.0
• dependabot/uv/isort-9.0.1
• dependabot/uv/mypy-2.3.1
• dependabot/uv/pandas-3.0.5
• dependabot/uv/pre-commit-4.6.2
• dependabot/uv/ruff-0.16.5
• dependabot/uv/snakemake-9.25.2
• dependabot/uv/snakemake-9.26.1
• docs/ai-policy-and-agents-md
• docs/create-site
• feat/add-logo
• feat/config-skill
• feat/hatch_to_uv
• feat/knn_regressor
• feat/more_configurations
• feat/raw-record-usage
• feat/tutorial
• fix/SLURM_STEPID
• fix/ci-failures
• fix/command-parsing
• fix/concurrent-db-access
• fix/consistent-time-units
• fix/empty_numericals
• fix/issue_83
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• fix/predict-rounding
• fix/predict-warning-list
• fix/predict_warnings
• fix/raw_predict
• fix/regex-escape-job-spec-literals
• fix/release
• fix/resource_fit_mpe_bounds
• fix/slurmise-record-no-slurmid
• gp/expand_raw_commands
• gp/fix_memory
• gp/fix_workflows
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• main
• print-no-toml
• tc/better-file-errors
• tc/consistent-names
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• tc/job_data_from_dict
• tc/patch-snakemake
• tc/resource-minima
• tc/snakemake-toml
• tc/update-config

Build # 40527903112

Build Type

push

github

Committed by web-flow

Commit Message

chore(deps): bump the all-deps group across 1 directory with 4 updates (#143)

Bumps the all-deps group with 4 updates in the / directory: [pandas](https://github.com/pandas-dev/pandas), [ruff](https://github.com/astral-sh/ruff), [coverage](https://github.com/coveragepy/coveragepy) and [snakemake](https://github.com/snakemake/snakemake).


Updates `pandas` from 3.0.6 to 3.1.0
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](https://github.com/pandas-dev/pandas/compare/v3.0.6...v3.1.0)

Updates `ruff` from 0.17.1 to 0.17.2
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](https://github.com/astral-sh/ruff/compare/0.17.1...0.17.2)

Updates `coverage` from 7.16.2 to 7.17.0
- [Release notes](https://github.com/coveragepy/coveragepy/releases)
- [Changelog](https://github.com/coveragepy/coveragepy/blob/main/CHANGES.rst)
- [Commits](https://github.com/coveragepy/coveragepy/compare/7.16.2...7.17.0)

Updates `snakemake` from 9.27.0 to 9.27.1
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Changelog](https://github.com/snakemake/snakemake/blob/v9.27.1/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakemake/compare/v9.27.0...v9.27.1)

---
updated-dependencies:
- dependency-name: pandas
  dependency-version: 3.1.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: all-deps
- dependency-name: ruff
  dependency-version: 0.17.2
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: all-deps
- dependency-name: coverage
  dependency-version: 7.17.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: all-deps
- dependency-name: snakemake
  dependency-version: 9.27.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: all-deps
.... (continued)

Coverage Stats

367 of 410 branches covered (89.51%)

Branch coverage included in aggregate %.

2763 of 2973 relevant lines covered (92.94%)

0.93 hits per line