HadoopGenomics / Hadoop-BAM
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Merge pull request #202 from heuermh/htsjdk-0.20.3

bump htsjdk dependency version to 2.20.3

7 of 7 new or added lines in 5 files covered. (100.0%)

2539 of 3979 relevant lines covered (63.81%)

0.64 hits per line

Relevant lines Covered
3979 RELEVANT LINES 2539 COVERED LINES
0.64 HITS PER LINE
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
395 master Merge pull request #202 from heuermh/htsjdk-0.20.3 bump htsjdk dependency version to 2.20.3 push web-flow travis-ci pending completion  
393 master Merge pull request #204 from heuermh/remove-oraclejdk Use openjdk in Travis CI build push web-flow travis-ci pending completion  
389 master Ensure splits are sorted by path name Pull #200 web-flow travis-ci pending completion  
381 master Merge pull request #194 from tomwhite/vcf-writer-override Changes to make it possible to subclass VCF and BCF input formats and… push web-flow travis-ci pending completion  
380 master Merge pull request #167 from tomwhite/intel-inflater-and-deflater Add options to use the Intel inflater or deflater when reading or push web-flow travis-ci pending completion  
379 master Add options to use the Intel inflater or deflater when reading or writing BAM files. Use of this option requires that you provide the GKL dependency (https://github.com/Intel-HLS/GKL) on the classpath. Pull #167 web-flow travis-ci pending completion  
378 master Merge pull request #197 from lbergelson/lb_delete_shards_serially delete shards as they're merged instead of afterwards push web-flow travis-ci pending completion  
377 master delete shards as they're merged instead of afterwards this should reduce the total amount of scratch disk space that is needed for performing merge operations and should have no effect on performance Pull #197 web-flow travis-ci pending completion  
376 master Make 8.0.0-SNAPSHOT the master development version. push tomwhite travis-ci pending completion  
371 master Merge pull request #195 from tomwhite/sam-file-merger-bugfix Don't add a terminator when merging SAM files. push web-flow travis-ci pending completion  
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