HadoopGenomics / Hadoop-BAM / 381
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Merge pull request #194 from tomwhite/vcf-writer-override

Changes to make it possible to subclass VCF and BCF input formats and…

17 of 17 new or added lines in 5 files covered. (100.0%)

2536 of 3979 relevant lines covered (63.73%)

0.64 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
 src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringVCFOutputFormat.java
2
100.0
 src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringBCFRecordWriter.java
8
100.0
 src/main/java/org/seqdoop/hadoop_bam/BCFRecordWriter.java

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringVCFOutputFormat.java
1
100.0
 src/main/java/org/seqdoop/hadoop_bam/BCFRecordWriter.java
2
100.0
 src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringVCFRecordWriter.java
3
100.0
 src/main/java/org/seqdoop/hadoop_bam/VCFRecordWriter.java
Jobs
ID Job ID Ran Files Coverage
1 381.1 0
63.73
 Travis Job 381.1
Source Files on build 381
Detailed source file information is not available for this build.