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FAIRmat-NFDI / pynxtools
97%
master: 79%

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LAST BUILD BRANCH: FixOrOperandError
DEFAULT BRANCH: master
Repo Added 03 May 2023 07:27AM UTC
Token W7LQyTpPvtxqWukwzhYv7llJE6ELtETmI regen
Build 2027 Last
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  • 121-code-for-handling-dicts-in-writer-should-be-improved
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05 Jul 2024 12:08PM UTC coverage: 96.517%. Remained the same
9808045393

Pull #362

github

web-flow
Merge 9509b91ab into 0438d96fe
Pull Request #362: Bugfix: Nomad parsing, atom_types mapping on chemical_formula and use of chemical_symbols

665 of 689 relevant lines covered (96.52%)

4.72 hits per line

Relevant lines Covered
Build:
Build:
689 RELEVANT LINES 665 COVERED LINES
4.72 HITS PER LINE
Source Files on fix_chemical_formula
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  • List 15
  • Changed 2
  • Source Changed 0
  • Coverage Changed 0
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
9808045393 fix_chemical_formula Merge 9509b91ab into 0438d96fe Pull #362 05 Jul 2024 12:09PM UTC web-flow github
96.52
9807993009 fix_chemical_formula Merge 8b0113256 into 0438d96fe Pull #362 05 Jul 2024 12:06PM UTC web-flow github
86.65
9807964851 fix_chemical_formula Merge 3388692f7 into aec8ab9f0 Pull #362 05 Jul 2024 12:03PM UTC web-flow github
86.65
9807932739 fix_chemical_formula Merge 8040724ea into aec8ab9f0 Pull #362 05 Jul 2024 12:01PM UTC web-flow github
96.52
9807898868 fix_chemical_formula Merge 33968994b into aec8ab9f0 Pull #362 05 Jul 2024 11:57AM UTC web-flow github
96.52
9805896513 fix_chemical_formula Merge 2f6baa3ec into aec8ab9f0 Pull #362 05 Jul 2024 09:09AM UTC web-flow github
96.52
9805750528 fix_chemical_formula Merge 329fa12a1 into aec8ab9f0 Pull #362 05 Jul 2024 08:58AM UTC web-flow github
96.52
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