Ensembl / ensembl-vep

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• release/87
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• fix_vertebrate_division_support
• postreleasefix/96
• release/96
• release/95.0
• release/95.1
• task/update_mane_bam_file
• task/update_bam_mane_file
• (detached from 2eb750f)
• release/95.2
• release/95.3
• postreleasefix/97
• release/97
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• release/98
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• release/97.2
• release/97.3
• ens-lgil_issue_template
• epaule-patch-1
• postreleasefix/99
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• release/97.4
• release/98.0
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• postreleasefix/100
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• release/99.1
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• postreleasefix/102
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• travis-updates/r104
• release/103.1
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• release/104.1
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• release/104.3
• postreleasefix/105
• release/105
• bugfix/vep-scratch-dir
• vr_fix_mane_duplicates
• postreleasefix/106
• release/106
• 105.0
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• release/107
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• release/106.0
• release/106.1
• main
• postreleasefix/108
• release/108
• revert-1170-postreleasefix/107
• release/107.0
• postreleasefix/109
• release/109
• svo_overlap
• release/108.0
• release/108.1
• revert-1289-cn_terms_so
• release/108.2
• fix/default-database-value
• bugfix/hps-quotas-spaces
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• postreleasefix/110
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• release/109.0
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• release/109.2
• release/109.3
• fix_docker
• fix/custom-annot-skip-vars
• fix/web-vep-input-format
• add/sv-id
• revert/pr_1423
• add/option_individual_zyg
• fix/manta-BND-end
• add/vcf-mobile-elements
• fix_nextflow
• add/annotation-stats
• config_channel_separation
• fix/custom-skipping
• improve-bnd
• fix_cache
• improve/warning
• fix/main-tests
• fix_hgvsg_use_accession
• postreleasefix/111
• fix_dump
• fix/unit-tests
• DB-patching
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• update-travis,-readme-and-docker
• fix/command-plugin-path
• software_version_order
• dbd_mysql_version
• CNV-TR
• fix_cross_contm
• improve/docker-action
• fix/singularity-permissions
• fix_docker_warning
• fix/relative-registry
• improve/summary-stats
• fix/standard_chr_name
• 2024_copright_update
• fix/REST-SV-warnings
• bug/fix-version-data
• fix/unit-tests-ensembl-io
• nextflow/seqera-platform
• improve_gencode_primary
• test-slurm
• check_ext_nxt
• fix_hgnc_id
• patch-1
• add/compara-install
• fix_sv_so
• error/mismatching-docker-version
• nextflow/vep_version
• hgvsg-error
• fix_coverll
• gtf/ncbi-cds-microbes
• nxt_fix
• update_gnomad_fields
• reg_upd
• read_version
• remove_non_indexed_cache
• fix_sv_insert
• fix_div_zero
• get_end/fix-tests
• set_offline