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Ensembl / ensembl-datacheck
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LAST BUILD BRANCH: feature/ncrna_canonic_member_core
DEFAULT BRANCH: master
Repo Added 21 Aug 2018 03:18PM UTC
Files 30
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LAST BUILD ON BRANCH feature/xref_datachecks
branch: feature/xref_datachecks
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  • feature/xref_datachecks
  • 110
  • Adaptive_memory_ENSPROD-4787
  • Compare_previous_version_go
  • DisplayName-with-commas-fix
  • DisplayName-with-commas-fix-release/105
  • DisplayNameFormat_update_105
  • DisplayNameFormat_update_106
  • DisplayNameFormat_update_107
  • DisplayNameFormat_update_main
  • ENSPROD-4980
  • EmailNotify
  • Simple_features_analysis_type
  • TapToJson
  • alphafold_datacheck
  • archive/master
  • attrib_value_update
  • bau/copyright-2022
  • bau/copyright-2023
  • bau/copyright-2024
  • biomart_dc
  • biomart_dc_fix
  • bug/fix_old_db_uri
  • bug/param_in_analysis
  • bug_fix/embedded_dc_output
  • bug_fix/skip_data_files
  • bug_fix/sundry_minor_fixes
  • bugfix/advisory_common_name
  • bugfix/ancestral_sequences_species_set
  • bugfix/assorted_fixes
  • bugfix/biomart_branch
  • bugfix/blank_sets
  • bugfix/catch_errors
  • bugfix/checksums_cds
  • bugfix/cmp_end
  • bugfix/compara-species-url
  • bugfix/compara_div_conditional
  • bugfix/config_flock
  • bugfix/controlledtables
  • bugfix/core_db_type
  • bugfix/core_stats_limit
  • bugfix/data-file-division-path
  • bugfix/db_name_format
  • bugfix/display_name_extra_character
  • bugfix/display_xref_exists
  • bugfix/elastic
  • bugfix/email_reports
  • bugfix/empty_output
  • bugfix/end_timestamp
  • bugfix/exon_bounds
  • bugfix/fk_multi_db
  • bugfix/gene_biotype_of
  • bugfix/genebuild_stable_id_prefix
  • bugfix/genebuild_start_date
  • bugfix/genebuild_version_integer
  • bugfix/go_xrefs
  • bugfix/homology_mlss
  • bugfix/insdc_rapid
  • bugfix/karyotype_chr_name
  • bugfix/lrgsequence-checksum
  • bugfix/merge-109
  • bugfix/metakey_url_format
  • bugfix/method_new_genebuild_metakeys
  • bugfix/method_new_genebuild_metakeys1
  • bugfix/misc
  • bugfix/missing_library
  • bugfix/motif_feature_file
  • bugfix/mt_chr_updates
  • bugfix/mt_location
  • bugfix/multi_coredb_selection
  • bugfix/nonprinting_chars
  • bugfix/old_assembly_chr
  • bugfix/old_db_variation
  • bugfix/old_ontology_compara
  • bugfix/ont_advisory
  • bugfix/optimise_query
  • bugfix/plastid_annotation
  • bugfix/release-105-build-clone
  • bugfix/release-109-conflicts
  • bugfix/remove_skeletons
  • bugfix/remove_stable_id_check
  • bugfix/rename_dc_module
  • bugfix/rr_display_name_format
  • bugfix/schema_patch_sort
  • bugfix/seqlevel_toplevel
  • bugfix/seqregion_synonyms
  • bugfix/server_uri_exceptions
  • bugfix/shared_species
  • bugfix/skipping_in_collections
  • bugfix/species_common_name
  • bugfix/species_id
  • bugfix/sundry_fixes
  • bugfix/synonym_names
  • bugfix/test-update-plants
  • bugfix/test_databases
  • bugfix/test_dbs_and_obsolete_files
  • bugfix/transcript-support-operator
  • bugfix/transcript-support-operator-106
  • bugfix/travis_skip_tests
  • bugfix/typo-adivisory-report
  • bugfix/undef_adaptor_test
  • bugfix/variation
  • bugfix/variation_datachecks
  • bugfix/variation_fk
  • bugfix/xref_fixes
  • bugfix/xref_prefixes_group
  • bugfix/xref_types_critical
  • bugfixes/344-on-release-103
  • bugfixes/344-on-release-104
  • bugfixes/fix-query-check-previous-db
  • canonical_transcript_fix_projection
  • compara/cafe_dc
  • compara_datachecks
  • compara_projected_gene_name
  • compare_previous_version_projected_synonym
  • compare_previous_version_synonyms
  • convert_tap_json
  • copyright-2020
  • copyright-2021
  • datacheck_fixes
  • datacheck_for_description_newline
  • datachecks_for_Xref
  • dnadb_creation
  • duplicate_xref
  • email_notify
  • evidence_free_go
  • feature/CompareSpeciesAlias
  • feature/ENSPROD-7673_division_name_include_in_report
  • feature/ENSPROD_7736_disallow_species_strain_group
  • feature/ENSPROD_7736_disallow_species_strain_group_106
  • feature/add_core_sync_group
  • feature/advisory_dc
  • feature/amonida/dc
  • feature/analysis_and_attribs
  • feature/analysis_db_version
  • feature/ancestral_group
  • feature/ancestral_sequences_name
  • feature/assembly_geneset_change
  • feature/assembly_metakeys
  • feature/better_diag_message
  • feature/biomart_species_metazoa
  • feature/cactus_meta_consistency
  • feature/canonical_member_core
  • feature/ccds_xref
  • feature/check_unique_keys
  • feature/codon_migration
  • feature/collection_db_test
  • feature/collective_advisory_dc_report
  • feature/compara_datachecks
  • feature/compara_schema
  • feature/compare_variation
  • feature/config_file
  • feature/datacheck_groups
  • feature/dc_results_to_es
  • feature/dc_sequence_checksum
  • feature/dependency_module_es
  • feature/desc_group_tidy
  • feature/dupe_xref_advisory
  • feature/ena_format_gff3
  • feature/exon_rank_sequential
  • feature/extend_gene_stats
  • feature/filter_behaviour
  • feature/fix_conflicts
  • feature/fk_prod_db
  • feature/force_multi
  • feature/funcgen_datachecks
  • feature/gene_biotype_timeout
  • feature/gene_datachecks
  • feature/hook_update_index
  • feature/improve_test_coverage
  • feature/merge_102_to_master
  • feature/merge_103
  • feature/misc_tweaks
  • feature/more_meta_checks
  • feature/more_testing_of_tests
  • feature/multidb
  • feature/mvp
  • feature/mvp-rebase-main
  • feature/mvp_110
  • feature/ncbi_gene_name
  • feature/ncrna_canonic_member_core
  • feature/new_datachecks
  • feature/non_core_dc_pipeline
  • feature/old_dba
  • feature/pipeline_emails
  • feature/pipeline_fixes
  • feature/pipeline_script
  • feature/pipeline_xref_datacheck
  • feature/raise_fail_status
  • feature/remove_stable_id
  • feature/repo_release_versions
  • feature/sample_group
  • feature/sample_text_placeholder
  • feature/schema_datachecks
  • feature/server_uri
  • feature/split_appris_tsl
  • feature/statistics
  • feature/test_db_patch_107
  • feature/test_db_patch_108
  • feature/test_db_patch_109
  • feature/test_db_patch_110
  • feature/test_db_patch_111
  • feature/test_db_patch_112
  • feature/test_db_update
  • feature/test_update
  • feature/testcase_old_uri_array
  • feature/update_cpanfile
  • feature/update_datachecks
  • feature/update_group
  • feature/update_group_script
  • feature/update_test
  • feature/update_test_db
  • feature/updated_datachecks
  • feature/versioned_genes
  • feature/website_packed_status
  • feature/xref_gene_symbol_transformer
  • features/ENSPROD-7978
  • features/allow-subspecies-for-plants
  • features/alphafold-logicname
  • features/codo-updates
  • features/ep-7119
  • features/ep-7140
  • features/es-no-port
  • features/long-running-dc-group
  • features/perl-5.26
  • features/slurm_112
  • fix/fan_funnel_dc
  • fix/genebuild_anno_metakey
  • fix/genebuild_anno_metakey1
  • fix/genebuild_anno_metakey2
  • fix/metadata-default-main
  • fix_index
  • fix_release_99
  • fix_synteny_sanity
  • fix_travis_slack_credentials
  • fix_view_problem
  • funcgen-dc-cleanup
  • funcgen_updates
  • gene_stable_id_display_xref
  • healthchecks_to_datachecks
  • hotfix/MetaKeyFormat
  • hotfix/check_mt_karyotype
  • hotfix/division_specific_repeatmasking
  • hotfix/gene-servionned-viruses
  • hotfix/repeat_nonvert
  • hotfix/repeatdetector_metakey
  • hotfix/repeatfeature
  • hotfix/repeatmasking_metakeys
  • hotfix/repeatmodeler_meta_key
  • hotfixes/viruses-division
  • jalvarez/mupport_gcf_main
  • jalvarez/support_gcf
  • luca-drf-display-name-format-regex
  • main
  • master
  • mbarba/brc_seqregions
  • mem_update
  • merge-conflicts-108-106
  • merge-release-110
  • merge/release/96
  • merge/release_104
  • merge_release_100
  • merge_release_98
  • merge_release_99
  • merge_release_99_master
  • new_datacheck/db_species_name
  • new_test/AltAllele
  • new_test/ExonRank
  • new_test/ExperimentHasFeatureSet
  • new_test/RegulatoryFeatureIsActive
  • new_test/SampleRegulatoryFeatureExists
  • new_test/SegmentationFileHasBigBed
  • new_test/exon_strand_order
  • new_test/exonsBoundaries
  • new_test/feature_position
  • non_core_dc_pipeline
  • one_karyotype_rank_dc
  • patch-1
  • predicted_xrefs
  • readme-dependencies
  • refseq_peptide_prefix_rw
  • release/100
  • release/101
  • release/102
  • release/103
  • release/104
  • release/105
  • release/106
  • release/107
  • release/108
  • release/109
  • release/110
  • release/111
  • release/96
  • release/97
  • release/98
  • release/99
  • revert-193-assembly_longer
  • revert-229-xref_prefix_fix
  • shared_display_xref
  • skip_human_polymorphic_pseudogenes
  • stable_id_display_xref
  • strain_type_dc
  • sundry_fixes
  • tap_to_json_bug
  • tmp
  • transcript_display_xref_suffix
  • transcript_same_name
  • transcript_same_name_99
  • uniprotkb_diplayxref_ids
  • unreviewed_xrefs
  • update/allow_blanks_core_meta
  • update/check_annotation_source
  • update/gene_biotypes_fix
  • update/gene_symbols_dc
  • update/skip_human_repeats
  • update_db_spec
  • update_test_db
  • update_tests_101
  • valid_display_name_fix
  • vsitnik-display_name_pat_108
  • vsitnik-fix-mt-only-chr
  • vsitnik-patch-1_prokka
  • vsitnik-patch-allowed_disp_name_pat_109
  • vsitnik-patch-allowed_dispnames_107
  • xref_desc_special_char
  • xref_html
  • xref_prefix_fix
  • xref_prefix_update
  • xref_prefixes

pending completion
323

Pull #75

travis-ci

web-flow
Advisory datachecks for comparing xref totals between two databases (principally intended for new and old versions of the same db, but not restricted to that).
Pull Request #75: Advisory datachecks for comparing xref totals between two databases

1589 of 1647 relevant lines covered (96.48%)

18.56 hits per line

Relevant lines Covered
Build:
Build:
1647 RELEVANT LINES 1589 COVERED LINES
18.56 HITS PER LINE
Source Files on feature/xref_datachecks
  • List 0
  • Changed 1
  • Source Changed 0
  • Coverage Changed 1
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
323 feature/xref_datachecks Advisory datachecks for comparing xref totals between two databases (principally intended for new and old versions of the same db, but not restricted to that). Pull #75 30 Jan 2019 07:01PM UTC web-flow travis-ci pending completion  
322 feature/xref_datachecks Advisory datachecks for comparing xref totals between two databases (principally intended for new and old versions of the same db, but not restricted to that). push 30 Jan 2019 06:26PM UTC james-monkeyshines travis-ci pending completion  
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