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pymc-devs / pymc3 / 3790
87%

Build:
DEFAULT BRANCH: master
Ran 22 Jan 2017 09:58AM UTC
Jobs 6
Files 113
Run time 17min
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Generators as Data and logp rescaling (#1684)

* Added mode argument to several step methods and advi to allow mode setting (e.g. nanguardmode) for Theano functions

* Created Generator Op with simple Test

* added ndim test

* updated test

* updated test, added test value check

* added test for replacing generator with shared variable

* added shortcut for generator op

* refactored test

* added population kwarg (no tests yet)

* added population kwarg for free var(autoencoder case)

* Revert "Added mode argument to several step methods and advi to allow mode setting (e.g. nanguardmode) for Theano functions"

This reverts commit 6bdb53a06.

* add docstring to generator Op

* rename population -> total_size

* update docstrings in model

* fix typo in `as_tensor` function

* add test for density rescaling

* add test for density with generators

* fix python2 error with generators

* test nan produced instead of error when generator is exhausted

* Setting new generator is now available

* Refactor test

* Refactor assertions

* fix typo

* refactor casting to DataGenerator

* make pickling potentially possible

* refactor logp scaling

* better resolving generator types with python2 and python3

192 of 192 new or added lines in 7 files covered. (100.0%)

7503 of 8853 relevant lines covered (84.75%)

2.74 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
pymc3/model.py
1
100.0
pymc3/theanof.py
3
100.0
pymc3/data.py
Jobs
ID Job ID Ran Files Coverage
1 3790.1 (PYTHON_VERSION=2.7 TESTCMD=" -vv --with-timer --with-coverage --cover-package=pymc3 -e test_examples -e test_distributions") 22 Jan 2017 10:15AM UTC 0
73.26
Travis Job 3790.1
2 3790.2 (PYTHON_VERSION=2.7 TESTCMD=" -vv --with-timer --with-coverage --cover-package=pymc3 pymc3.tests.test_distributions pymc3.tests.test_examples") 22 Jan 2017 10:00AM UTC 0
34.63
Travis Job 3790.2
3 3790.3 (PYTHON_VERSION=2.7 TESTCMD=" -vv --with-timer --with-coverage --cover-package=pymc3 pymc3.tests.test_distributions_random") 22 Jan 2017 09:58AM UTC 0
28.88
Travis Job 3790.3
4 3790.4 (PYTHON_VERSION=3.6 TESTCMD=" -vv --with-timer --with-coverage --cover-package=pymc3 -e test_examples -e test_distributions") 22 Jan 2017 10:16AM UTC 0
73.25
Travis Job 3790.4
5 3790.5 (PYTHON_VERSION=3.6 TESTCMD=" -vv --with-timer --with-coverage --cover-package=pymc3 pymc3.tests.test_distributions pymc3.tests.test_examples") 22 Jan 2017 10:01AM UTC 0
34.63
Travis Job 3790.5
6 3790.6 (PYTHON_VERSION=3.6 TESTCMD=" -vv --with-timer --with-coverage --cover-package=pymc3 pymc3.tests.test_distributions_random") 22 Jan 2017 10:10AM UTC 0
28.88
Travis Job 3790.6
Source Files on build 3790
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