broadinstitute / cromwell / 11049
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develop: 95%

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Jobs 1
Files 279
Run time 34s
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11049

Pull #1735

travis-ci

web-flow 
Release 23
Pull Request #1735: Release 23

1700 of 1700 new or added lines in 142 files covered. (100.0%)

4781 of 6819 relevant lines covered (70.11%)

0.7 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
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 backend/src/main/scala/cromwell/backend/BackendCacheHitCopyingActor.scala
1
100.0
 backend/src/main/scala/cromwell/backend/BackendWorkflowInitializationActor.scala
1
100.0
 backend/src/main/scala/cromwell/backend/async/AsyncBackendJobExecutionActor.scala
1
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 backend/src/main/scala/cromwell/backend/io/WorkflowPaths.scala
1
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 backend/src/main/scala/cromwell/backend/io/WorkflowPathsWithDocker.scala
1
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 backend/src/main/scala/cromwell/backend/wdl/ReadLikeFunctions.scala
1
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 backend/src/main/scala/cromwell/backend/wfs/DefaultWorkflowPathBuilder.scala
1
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 core/src/main/scala/cromwell/core/path/DefaultPathBuilder.scala
1
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 core/src/main/scala/cromwell/core/path/PathImplicits.scala
1
100.0
 core/src/main/scala/cromwell/core/simpleton/WdlValueSimpleton.scala
1
100.0
 database/migration/src/main/scala/cromwell/database/migration/metadata/table/symbol/SymbolTableMigration.scala
1
100.0
 database/migration/src/main/scala/cromwell/database/migration/workflowoptions/ClearMetadataEntryWorkflowOptions.scala
1
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 database/migration/src/main/scala/cromwell/database/migration/workflowoptions/EncryptWorkflowStoreEntryWorkflowOptions.scala
1
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 engine/src/main/scala/cromwell/engine/EngineWorkflowDescriptor.scala
1
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 engine/src/main/scala/cromwell/engine/workflow/WorkflowActor.scala
1
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 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/callcaching/CallCache.scala
1
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/callcaching/EngineJobHashingActor.scala
1
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 engine/src/main/scala/cromwell/jobstore/EmptyJobStoreActor.scala
1
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 services/src/main/scala/cromwell/services/metadata/impl/MetadataDatabaseAccess.scala
1
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 services/src/main/scala/cromwell/services/metadata/impl/ReadMetadataActor.scala
1
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 src/main/scala/cromwell/Main.scala
1
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesCacheHitCopyingActor.scala
1
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/io/package.scala
1
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 supportedBackends/sfs/src/main/scala/cromwell/backend/impl/sfs/config/ConfigHashingStrategy.scala
1
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 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystem.scala
1
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 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemCacheHitCopyingActor.scala
2
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 backend/src/main/scala/cromwell/backend/BackendLifecycleActorFactory.scala
2
100.0
 backend/src/main/scala/cromwell/backend/backend.scala
2
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 database/migration/src/main/scala/cromwell/database/migration/custom/MigrationTaskChange.scala
2
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 engine/src/main/scala/cromwell/engine/workflow/lifecycle/CopyWorkflowOutputsActor.scala
2
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 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/CallMetadataHelper.scala
2
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 supportedBackends/htcondor/src/main/scala/cromwell/backend/impl/htcondor/HtCondorBackendFactory.scala
2
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/GenomicsFactory.scala
2
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesBackendSingletonActor.scala
2
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesConfiguration.scala
2
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesJobCachingActorHelper.scala
2
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/callcaching/JesBackendFileHashing.scala
2
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/statuspolling/JesApiQueryManager.scala
2
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemAsyncJobExecutionActor.scala
2
100.0
 supportedBackends/spark/src/main/scala/cromwell/backend/impl/spark/SparkBackendFactory.scala
3
100.0
 core/src/main/scala/cromwell/core/simpleton/WdlValueBuilder.scala
3
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/EngineJobExecutionActor.scala
3
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/ExecutionStore.scala
3
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 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/WorkflowExecutionActorData.scala
3
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 engine/src/main/scala/cromwell/subworkflowstore/EmptySubWorkflowStoreActor.scala
3
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 engine/src/main/scala/cromwell/webservice/WorkflowJsonSupport.scala
3
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesWorkflowPaths.scala
3
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/Run.scala
3
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemBackendLifecycleActorFactory.scala
3
100.0
 supportedBackends/spark/src/main/scala/cromwell/backend/impl/spark/SparkJobExecutionActor.scala
4
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 core/src/main/scala/cromwell/core/WorkflowSourceFilesCollection.scala
4
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 core/src/main/scala/cromwell/core/path/proxy/RetryableFileSystemProviderProxy.scala
4
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 core/src/main/scala/cromwell/util/StopAndLogSupervisor.scala
4
100.0
 engine/src/main/scala/cromwell/engine/workflow/workflowstore/SqlWorkflowStore.scala
4
100.0
 engine/src/main/scala/cromwell/subworkflowstore/SubWorkflowStoreActor.scala
4
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesBackendLifecycleActorFactory.scala
4
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/impl/sfs/config/ConfigBackendFileHashing.scala
4
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemExpressionFunctions.scala
5
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesJobExecutionActor.scala
6
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesFinalizationActor.scala
6
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesInitializationActor.scala
6
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesJobPaths.scala
6
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 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/statuspolling/JesPollingActor.scala
7
100.0
 database/migration/src/main/scala/cromwell/database/migration/workflowoptions/RenameWorkflowOptionsInMetadata.scala
7
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 database/migration/src/main/scala/cromwell/database/migration/workflowoptions/WorkflowOptionsRenaming.scala
7
100.0
 engine/src/main/scala/cromwell/engine/workflow/WorkflowManagerActor.scala
7
100.0
 filesystems/gcs/src/main/scala/cromwell/filesystems/gcs/GcsPathBuilder.scala
7
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/impl/sfs/config/DeclarationValidation.scala
8
100.0
 database/migration/src/main/scala/cromwell/database/migration/custom/BatchedTaskChange.scala
8
100.0
 engine/src/main/scala/cromwell/engine/EngineFilesystems.scala
8
100.0
 supportedBackends/htcondor/src/main/scala/cromwell/backend/impl/htcondor/HtCondorJobExecutionActor.scala
9
100.0
 backend/src/main/scala/cromwell/backend/callcaching/CacheHitDuplicating.scala
9
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesExpressionFunctions.scala
10
100.0
 core/src/main/scala/cromwell/core/path/PathWriter.scala
10
100.0
 database/migration/src/main/scala/cromwell/database/migration/workflowoptions/WorkflowOptionsChange.scala
10
100.0
 engine/src/main/scala/cromwell/webservice/metadata/MetadataBuilderActor.scala
10
100.0
 filesystems/gcs/src/main/scala/cromwell/filesystems/gcs/auth/RefreshableOAuth2Credentials.scala
11
100.0
 core/src/main/scala/cromwell/core/path/proxy/FileSystemProxy.scala
11
100.0
 core/src/main/scala/cromwell/util/TryUtil.scala
12
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/JobPreparationActor.scala
13
100.0
 core/src/main/scala/cromwell/util/PromiseActor.scala
13
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 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/OutputStore.scala
14
100.0
 engine/src/main/scala/cromwell/engine/workflow/SingleWorkflowRunnerActor.scala
21
100.0
 engine/src/main/scala/cromwell/webservice/CromwellApiService.scala
23
100.0
 core/src/main/scala/cromwell/core/path/proxy/PathProxy.scala
31
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/MaterializeWorkflowDescriptorActor.scala
33
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/SubWorkflowExecutionActor.scala
33
100.0
 filesystems/gcs/src/main/scala/cromwell/filesystems/gcs/auth/GoogleAuthMode.scala
43
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesAsyncBackendJobExecutionActor.scala
83
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/WorkflowExecutionActor.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 engine/src/main/scala/cromwell/engine/workflow/SingleWorkflowRunnerActor.scala
1
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/EngineJobExecutionActor.scala
1
100.0
 engine/src/main/scala/cromwell/engine/backend/BackendConfiguration.scala
1
100.0
 database/migration/src/main/scala/cromwell/database/migration/restart/table/RenameWorkflowOptionKeysMigration.scala
1
100.0
 src/main/scala/cromwell/Main.scala
1
100.0
 engine/src/main/scala/cromwell/webservice/CromwellApiService.scala
1
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/impl/sfs/config/ConfigWdlNamespace.scala
1
100.0
 engine/src/main/scala/cromwell/engine/WdlFunctions.scala
1
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemInitializationActor.scala
1
100.0
 engine/src/main/scala/cromwell/engine/workflow/tokens/TokenPool.scala
1
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/MaterializeWorkflowDescriptorActor.scala
1
100.0
 core/src/main/scala/cromwell/core/callcaching/CallCachingMode.scala
1
100.0
 supportedBackends/htcondor/src/main/scala/cromwell/backend/impl/htcondor/HtCondorInitializationActor.scala
1
100.0
 core/src/main/scala/cromwell/core/logging/LoggerWrapper.scala
1
100.0
 backend/src/main/scala/cromwell/backend/async/AsyncBackendJobExecutionActor.scala
1
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesJobCachingActorHelper.scala
1
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/impl/sfs/config/ConfigBackendFileHashing.scala
1
100.0
 engine/src/main/scala/cromwell/webservice/metadata/WorkflowQueryPagination.scala
1
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemExpressionFunctions.scala
1
100.0
 database/sql/src/main/scala/cromwell/database/sql/SqlConverters.scala
1
100.0
 backend/src/main/scala/cromwell/backend/RuntimeAttributeDefinition.scala
1
100.0
 supportedBackends/htcondor/src/main/scala/cromwell/backend/impl/htcondor/HtCondorJobExecutionActor.scala
1
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/impl/sfs/config/ConfigAsyncJobExecutionActor.scala
1
100.0
 engine/src/main/scala/cromwell/engine/workflow/WorkflowActor.scala
1
100.0
 database/migration/src/main/scala/cromwell/database/migration/liquibase/DiffResultFilter.scala
1
100.0
 database/sql/src/main/scala/cromwell/database/slick/SlickDatabase.scala
1
100.0
 supportedBackends/sfs/src/main/scala/cromwell/backend/sfs/SharedFileSystemAsyncJobExecutionActor.scala
1
100.0
 database/migration/src/main/scala/cromwell/database/migration/restart/table/JobStoreSimpletonMigration.scala
2
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesAsyncBackendJobExecutionActor.scala
3
100.0
 database/sql/src/main/scala/cromwell/database/slick/tables/WorkflowStoreEntryComponent.scala
4
100.0
 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/WorkflowExecutionActorData.scala
4
100.0
 database/sql/src/main/scala/cromwell/database/slick/WorkflowStoreSlickDatabase.scala
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 engine/src/main/scala/cromwell/engine/workflow/lifecycle/execution/WorkflowExecutionActor.scala
8
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 engine/src/main/scala/cromwell/engine/workflow/workflowstore/SqlWorkflowStore.scala
11
100.0
 supportedBackends/jes/src/main/scala/cromwell/backend/impl/jes/JesInitializationActor.scala
Jobs
ID Job ID Ran Files Coverage
1 11049.1 (BUILD_TYPE=sbt) 0
70.11
 Travis Job 11049.1
Source Files on build 11049
Detailed source file information is not available for this build.