111: 82%

Ran 26 Jun 2014 03:27PM CUT

Jobs 1

Files 270

Run time 2min

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Build # 178

Build Type

Pull #17

travis-ci

Committed by

willmclaren

Commit Message

Restore read_coverage support

Restore read_coverage data support removed in 75. Also support the has_coverage field and the downstream effects on rendered sequence of secondary strains - strains with no explicit read coverage data are represented in lowercase where there is no genotype call available.

Pull Request Pull Request #17: Restore read coverage support

Run Details

55 of 55 new or added lines in 1 file covered. (100.0%)

24362 of 33078 relevant lines covered (73.65%)

573.74 hits per line

New Missed Lines in Diff

Lines	Coverage	∆	File
55	2.45		modules/Bio/EnsEMBL/StrainSlice.pm

Jobs

ID	Job ID	Ran	Files	Coverage
1	178.1 (COVERALLS=true DB=mysql)	26 Jun 2014 03:27PM CUT	270	73.65	Travis Job 178.1

Source Files on build 178

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Coverage	File	Lines	Relevant	Covered	Missed	Hits/Line
2.45	modules/Bio/EnsEMBL/StrainSlice.pm	859	286	7	279	67.0
3.08	modules/Bio/EnsEMBL/Utils/TranscriptSNPs.pm	447	130	4	126	23.0
5.0	modules/Bio/EnsEMBL/LRGSlice.pm	304	100	5	95	57.0
8.33	modules/Bio/EnsEMBL/DensityFeatureSet.pm	290	48	4	44	1.0
9.26	modules/Bio/EnsEMBL/Utils/Net.pm	227	54	5	49	2.0
10.91	modules/Bio/EnsEMBL/DnaDnaAlignFeature.pm	381	110	12	98	9.0
12.5	modules/Bio/EnsEMBL/DBSQL/MergedAdaptor.pm	229	48	6	42	67.0
13.51	modules/Bio/EnsEMBL/IdMapping/TinyGene.pm	307	37	5	32	1.0
14.81	modules/Bio/EnsEMBL/Root.pm	205	27	4	23	89.0
16.67	modules/Bio/EnsEMBL/Utils/IO/FeatureSerializer.pm	101	18	3	15	2.0

Showing 1 to 10 of 270 entries

Ensembl / ensembl / 178
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release/111: 82%

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Ensembl / ensembl / 178 82% release/111: 82%

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New Missed Lines in Diff

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Source Files on build 178

Ensembl / ensembl / 178
82%
release/111: 82%

README BADGES
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