199
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Ran 24 Nov 2016 02:37PM UTC

Jobs 24

Files 5

Run time 21min

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Build # 199

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Merge pull request #32 from hammerlab/develop

Few small changes:

1. Don't fail if psis-loo doesn't run after model estimation
2. Add drop_intercept param to fit_stan_survival_model, since not all models want intercept terms
3. New example model notebook containing gamma survival model, in bring-your-own model form
4. add 'beta_time' option to plot_coefs, to plot time-varying effects if estimated

Run Details

117 of 117 new or added lines in 2 files covered. (100.0%)

462 of 588 relevant lines covered (78.57%)

9.18 hits per line

New Missed Lines in Diff

Lines	Coverage	∆	File
13	100.0		survivalstan/utils.py

Jobs

ID	Job ID	Ran	Coverage
1	199.1 (TEST=test/test_exp_survival_model.py)	24 Nov 2016 02:37PM UTC	26.19	Travis Job 199.1
2	199.2 (TEST=test/test_exp_survival_model_sim.py)	24 Nov 2016 02:38PM UTC	27.72	Travis Job 199.2
3	199.3 (TEST=test/test_pem_survival_model.py)	24 Nov 2016 02:38PM UTC	52.89	Travis Job 199.3
4	199.4 (TEST=test/test_pem_survival_model_sim.py)	24 Nov 2016 02:38PM UTC	36.9	Travis Job 199.4
5	199.5 (TEST=test/test_weibull_survival_model.py)	24 Nov 2016 02:38PM UTC	27.04	Travis Job 199.5
6	199.6 (TEST=test/test_weibull_survival_model_sim.py)	24 Nov 2016 02:42PM UTC	28.57	Travis Job 199.6
7	199.7 (TEST=test/test_pem_survival_model_varcoefs.py)	24 Nov 2016 02:43PM UTC	42.18	Travis Job 199.7
8	199.8 (TEST=test/test_pem_survival_model_varcoefs_sim.py)	24 Nov 2016 02:43PM UTC	42.18	Travis Job 199.8
9	199.9 (TEST=test/test_pem_survival_model_timevarying.py)	24 Nov 2016 02:43PM UTC	67.35	Travis Job 199.9
10	199.10 (TEST=test/test_pem_survival_model_timevarying_sim.py)	24 Nov 2016 02:44PM UTC	54.59	Travis Job 199.10
11	199.11 (TEST=test/test_byo-gamma_survival_model.py)	24 Nov 2016 02:48PM UTC	26.36	Travis Job 199.11
12	199.12 (TEST=test/test_byo-gamma_survival_model_sim.py)	24 Nov 2016 02:48PM UTC	27.89	Travis Job 199.12
13	199.13 (TEST=test/test_exp_survival_model.py)	24 Nov 2016 02:48PM UTC	26.02	Travis Job 199.13
14	199.14 (TEST=test/test_exp_survival_model_sim.py)	24 Nov 2016 02:49PM UTC	27.55	Travis Job 199.14
15	199.15 (TEST=test/test_pem_survival_model.py)	24 Nov 2016 02:50PM UTC	52.72	Travis Job 199.15
16	199.16 (TEST=test/test_pem_survival_model_sim.py)	24 Nov 2016 02:52PM UTC	36.73	Travis Job 199.16
17	199.17 (TEST=test/test_weibull_survival_model.py)	24 Nov 2016 02:53PM UTC	26.87	Travis Job 199.17
18	199.18 (TEST=test/test_weibull_survival_model_sim.py)	24 Nov 2016 02:53PM UTC	28.4	Travis Job 199.18
19	199.19 (TEST=test/test_pem_survival_model_varcoefs.py)	24 Nov 2016 02:54PM UTC	42.01	Travis Job 199.19
20	199.20 (TEST=test/test_pem_survival_model_varcoefs_sim.py)	24 Nov 2016 02:54PM UTC	42.01	Travis Job 199.20
21	199.21 (TEST=test/test_pem_survival_model_timevarying.py)	24 Nov 2016 02:58PM UTC	67.18	Travis Job 199.21
22	199.22 (TEST=test/test_pem_survival_model_timevarying_sim.py)	24 Nov 2016 02:58PM UTC	54.42	Travis Job 199.22
23	199.23 (TEST=test/test_byo-gamma_survival_model.py)	24 Nov 2016 02:59PM UTC	26.19	Travis Job 199.23
24	199.24 (TEST=test/test_byo-gamma_survival_model_sim.py)	24 Nov 2016 02:59PM UTC	27.72	Travis Job 199.24

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