NeuralEnsemble / elephant / 324

88%

push

travis-ci

CSD implentation - icsd and kcsd (#93)

* First commit for integrating neo and xCSD

* Missing file

* Adding FWD scheme as test cases

* updating with the latest kCSD code from Neuroinflab/kCSD-python/elephant

* adding 1d and 3d cases of kcsd implentation within the framework

* cleaner import of kcsd classes

* progress on writing tests for kcsd, error with paths

* gitblues

* python3 compatibility, and documentation for the csd

* adding missing docstrings, and correcting exeption handling

* removing return None statements

* adding test for the accuracy of estimation, and additional checks on units

* kCSD works, now to fix icsd

* missing files

* First pass working icsd and kcsd

* Changing how default params are handled, stdcsd ele_pos closeness check revisted

* changing the input arguments to the function, and some variable names

* Getting iCSD and kCSD to work with elephant

* Updating readme, and adding some basic test cases for csd

* doc string changes for the parameters

* fixing the tests for pep8, and correcting kcsd params

* removed reduntant comments for estimate_csd function

* removed reduntant stuff using icsd.estimate_csd function

* removed quantities patching

* moved example codes to if __name__ == "__main__": part

* removed deprecated file

* file info

* docstring dedent, some cleanup

* contributor names, folder name changes before merge

* removing __main__ from comments

1052 of 1052 new or added lines in 9 files covered. (100.0%)

8608 of 9455 relevant lines covered (91.04%)

3.85 hits per line