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int-brain-lab / ibleatools / 39982562539
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DEFAULT BRANCH: main
Ran 23 Oct 2026 04:00PM UTC
Jobs 1
Files 66
Run time 1min
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23 Oct 2026 03:56PM UTC coverage: 49.166% (-0.04%) from 49.203%
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Fix the CSD decay fit, default DARTsort scratch to the temp dir, add DECODER_VINTAGES (#154)

- features.lf has ignored decay_features=False since #70 dropped its
    `if decay_features:` guard, so features.csd also fitted the PSD decay
    (specparam) on its CSD and BPR traces: about 2 s per snippet, nperseg and
    low r-squared warnings for every channel, and 22 unused *_csd / *_bpr decay
    columns in each snippet's csd_features.pqt. The aggregated features are
    unchanged, since those columns were dropped at aggregation.
  - Without a scratch_dir, dart_subtraction_numpy writes DARTsort's temporary
    output under tempfile.gettempdir()/dartsort (which honours $TMPDIR) instead
    of trying /scratch/dartsort/ first and logging a warning on every call where
    it could not be created. An explicit scratch_dir that cannot be created now
    raises OSError instead of silently falling back. _setup_scratch_directory is
    removed.
  - ephysatlas.models.DECODER_VINTAGES maps each published channel-level region
    decoder's Hugging Face repo id to the release it defaults to (2026_W42 for
    both), so the alignment GUI reads the decoders' default from ibleatools as it
    already does for the alignment model (ephysatlas.alignment.VINTAGE).
  - Changelog: entries for the three changes, and PR references for #152 and
    #153.

4714 of 9588 relevant lines covered (49.17%)

0.49 hits per line

Coverage Regressions

Lines Coverage ∆ File
42
90.32
0.17% features.py
3
92.11
0.21% models/__init__.py
Jobs
ID Job ID Ran Files Coverage
1 39982562539.1 23 Oct 2026 04:00PM UTC 66
49.17
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Source Files on build 39982562539
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