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Reentrant async batch (#9745)

* First pass at reentrant processing

Signed-off-by: Matt Long <ml@medplum.com>

* Code cleanup

Signed-off-by: Matt Long <ml@medplum.com>

* tests

Signed-off-by: Matt Long <ml@medplum.com>

* change default checkpointing

Signed-off-by: Matt Long <ml@medplum.com>

* [autofix.ci] apply automated fixes

* More logging and PR feedback

Signed-off-by: Matt Long <ml@medplum.com>

* Fix typo in core logger

Signed-off-by: Matt Long <ml@medplum.com>

* Improved logging

Signed-off-by: Matt Long <ml@medplum.com>

* PR feedback

Signed-off-by: Matt Long <ml@medplum.com>

* fix tests

Signed-off-by: Matt Long <ml@medplum.com>

* Opt-in feature flag for reentrant async batches

Signed-off-by: Matt Long <ml@medplum.com>

* Reuse logger instance

Signed-off-by: Matt Long <ml@medplum.com>

* Account for opt-in flag in tests

Signed-off-by: Matt Long <ml@medplum.com>

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Signed-off-by: Matt Long <ml@medplum.com>
Co-authored-by: autofix-ci[bot] <114827586+autofix-ci[bot]@users.noreply.github.com>

21803 of 24761 branches covered (88.05%)

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252 of 270 new or added lines in 8 files covered. (93.33%)

38901 of 41257 relevant lines covered (94.29%)

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