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docs(ci): drop DO NOT MERGE banners, reflect actual intentional-vendoring plan

These files are meant to be merged, not left as pure throwaway scratch code
-- the point is to decouple the flatpak publish + Pages pipeline from tagged
releases so it can be iterated on without cutting real ToolHive Studio
releases (which trigger real auto-updates and binary signing) just to test
changes here. The old banners said the opposite and confused reviewers.

Also trimmed the internal contingency language (upstreaming vs. staying
vendored long-term) -- that's our own planning, not something that needs to
live in a public repo file.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>