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pirl-unc / tcrsift / 28820162390
85%

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DEFAULT BRANCH: main
Ran 06 Jul 2026 08:16PM UTC
Jobs 1
Files 48
Run time 1min
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06 Jul 2026 08:12PM UTC coverage: 84.954% (+0.004%) from 84.95%
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3.8.0: til-select CLI dominant-specificity selection (per-lineage min + antigen labels) (#332)

Surface select_by_dominant_specificity on the til-select CLI: --dominant-specificity --per-lineage-min CD8=2,CD4=5 --min-specificity --antigen-labels labels.csv. Condition axis = per-sample cell counts (samples are user-labeled antigen pools); lineage auto-derived from cd4_to_cd8_ratio when not given; antigen labels from a condition→label CSV routed through pretty_antigen. Adds is_dominant_specific/specificity/dominant_antigen to the master + abTCR_dominant_specificity.csv. Closes #328.

12761 of 15021 relevant lines covered (84.95%)

0.85 hits per line

Coverage Regressions

Lines Coverage ∆ File
401
65.78
0.32% cli.py
23
71.6
0.51% til_select.py
Jobs
ID Job ID Ran Files Coverage
1 python-3.12 - 28820162390.1 06 Jul 2026 08:16PM UTC 48
84.95
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Source Files on build 28820162390
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Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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