28816804761
85%

Ran 06 Jul 2026 07:18PM UTC

Jobs 1

Files 48

Run time 1min

Badge

Embed ▾

Committed 06 Jul 2026 07:13PM UTC coverage: 84.856% (+0.03%) from 84.828%

Build # 28816804761

Build Type

push

github

Committed by

web-flow

Commit Message

3.5.0: annotate_cells marker-count cluster override (CTA→Tumor) (#329)

MarkerCountOverride(label, gene_set, min_distinct, min_cluster_frac, rescue, count_col): relabel a cluster on positive marker-count evidence after the argmax (e.g. collagen+CTA cluster → Tumor), gene set caller-supplied so CTA typing stays oncoref's job. Optional TF-score rescue for low-coverage clusters. Exposes per-cell '# distinct markers from SET' obs column for the marker-load UMAP + doublet QC. Closes #325.

Coverage Stats

12602 of 14851 relevant lines covered (84.86%)

0.85 hits per line

Coverage Regressions

Lines	Coverage	∆	File
16	92.86	-0.08%	annotate_cells.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	python-3.12 - 28816804761.1	06 Jul 2026 07:18PM UTC	48	84.86	GitHub Action Run

pirl-unc / tcrsift / 28816804761
85%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Coverage Regressions

Jobs

Source Files on build 28816804761

pirl-unc / tcrsift / 28816804761 85%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Coverage Regressions

Jobs

Source Files on build 28816804761

pirl-unc / tcrsift / 28816804761
85%

README BADGES
x