Ran
|
Jobs
3
|
Files
41
|
Run time
6min
|
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README BADGES
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travis-ci
5297 of 7600 relevant lines covered (69.7%)
2.08 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
97.78 |
0.0% | tools/krona.py |
2 |
96.36 |
12.31% | tools/diamond.py |
2 |
93.55 |
42.84% | tools/trinity.py |
2 |
84.62 |
-8.24% | tools/trimmomatic.py |
2 |
91.89 |
-0.21% | tools/mvicuna.py |
4 |
87.93 |
17.69% | tools/last.py |
5 |
81.08 |
25.53% | tools/muscle.py |
6 |
84.62 |
0.3% | tools/blast.py |
6 |
89.09 |
-10.91% | tools/prinseq.py |
6 |
92.41 |
5.52% | tools/kraken.py |
9 |
81.36 |
-5.18% | tools/gatk.py |
11 |
86.67 |
0.16% | tools/mafft.py |
13 |
77.73 |
10.45% | util/misc.py |
17 |
67.61 |
1.93% | util/version.py |
17 |
85.0 |
-0.88% | tools/samtools.py |
20 |
80.92 |
-3.51% | tools/novoalign.py |
26 |
47.76 |
-5.67% | util/cmd.py |
43 |
79.74 |
3.98% | tools/picard.py |
47 |
13.27 |
1.31% | util/genbank.py |
49 |
71.73 |
-0.11% | interhost.py |
49 |
74.27 |
1.14% | tools/mummer.py |
57 |
13.16 |
-50.0% | util/stats.py |
58 |
60.87 |
2.35% | util/file.py |
60 |
88.85 |
-0.08% | taxon_filter.py |
73 |
88.12 |
0.47% | assembly.py |
88 |
82.67 |
6.3% | read_utils.py |
89 |
69.01 |
-0.94% | intrahost.py |
104 |
71.49 |
-5.92% | illumina.py |
127 |
71.55 |
-18.34% | metagenomics.py |
145 |
55.28 |
-9.7% | tools/__init__.py |
ID | Job ID | Ran | Files | Coverage | |
---|---|---|---|---|---|
1 | 3172.1 | 41 |
69.61 |
Travis Job 3172.1 | |
2 | 3172.2 | 41 |
69.53 |
Travis Job 3172.2 | |
3 | 3172.3 | 41 |
69.06 |
Travis Job 3172.3 |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|