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pirl-unc / hitlist / 27217804516

09 Jun 2026 03:41PM UTC coverage: 80.284% (-0.2%) from 80.498%
27217804516

push

github

web-flow
v1.34.3: add pmhc --by-tissue (source-tissue distribution for a gene) (#308)

Answers 'which (healthy) tissues are this gene's peptides detected in?' in one
command: hitlist pmhc --gene PRAME --source-context healthy --by-tissue.
Groups a gene's MS-attested peptides by source_tissue with distinct
peptide/observation/PMID counts, honoring --species and --source-context
(healthy spans src_healthy_tissue/thymus/reproductive).

5261 of 6553 relevant lines covered (80.28%)

0.8 hits per line

Source File
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53.98
/cli.py


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