griffithlab / pVACtools / 26468932085
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DEFAULT BRANCH: master
Ran
Jobs 3
Files 145
Run time 1min
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coverage: 82.613% (-1.3%) from 83.932%
26468932085

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susannasiebert 
Revert "Exclude tests folder from package"

This reverts commit aed3f55b4.

9517 of 11520 relevant lines covered (82.61%)

2.48 hits per line

Coverage Regressions

Lines Coverage ∆ File
262
45.14
 -11.72% pvactools/lib/prediction_class.py
125
81.92
 -3.47% pvactools/lib/output_parser.py
39
85.98
 -0.3% pvactools/tools/pvacvector/run.py
38
87.54
 -0.04% pvactools/lib/pipeline.py
36
90.8
 -3.78% pvactools/lib/update_tiers.py
34
94.91
 0.13% pvactools/lib/aggregate_all_epitopes.py
27
78.95
 -1.05% pvactools/tools/pvacseq/run.py
14
83.77
 -0.64% pvactools/tools/pvacsplice/run.py
13
88.59
 0.56% pvactools/lib/run_utils.py
12
83.42
 -0.79% pvactools/tools/pvacfuse/run.py
11
89.22
 0.26% pvactools/lib/netmhc_stab.py
11
66.67
 8.6% pvactools/tools/main.py
10
82.46
 -1.03% pvactools/tools/pvacbind/run.py
9
78.57
 -3.43% pvactools/tools/pvacbind/main.py
9
80.85
 -2.79% pvactools/tools/pvacfuse/main.py
9
83.93
 -1.56% pvactools/tools/pvacseq/main.py
9
82.0
 -2.48% pvactools/tools/pvacsplice/main.py
9
62.5
 -9.38% pvactools/tools/pvacvector/main.py
8
92.56
 2.56% pvactools/lib/get_best_candidate.py
8
96.07
 -0.13% pvactools/lib/top_score_filter.py
7
95.4
 -0.1% pvactools/lib/net_chop.py
6
85.45
 -0.26% pvactools/tools/compare.py
2
92.86
 -0.69% pvactools/lib/combine_parsed_outputs.py
2
98.41
 9.78% pvactools/lib/sort.py
1
98.81
 -1.19% pvactools/lib/binding_filter.py
1
10.61
 -0.08% pvactools/lib/generate_reviews_files.py
1
86.45
 -0.21% pvactools/lib/input_file_converter.py
1
90.0
 0.0% pvactools/tools/pvacbind/binding_filter.py
1
96.55
 0.4% pvactools/tools/pvacbind/generate_aggregated_report.py
1
91.67
 0.0% pvactools/tools/pvacbind/update_tiers.py
1
93.95
 -0.47% pvactools/tools/pvaccompare/run_utils.py
1
90.0
 0.0% pvactools/tools/pvacfuse/binding_filter.py
1
95.65
 -0.18% pvactools/tools/pvacfuse/coverage_filter.py
1
96.77
 0.35% pvactools/tools/pvacfuse/generate_aggregated_report.py
1
91.67
 0.0% pvactools/tools/pvacfuse/update_tiers.py
1
90.0
 0.0% pvactools/tools/pvacseq/binding_filter.py
1
97.06
 -0.08% pvactools/tools/pvacseq/coverage_filter.py
1
97.3
 0.15% pvactools/tools/pvacseq/generate_aggregated_report.py
1
91.67
 0.0% pvactools/tools/pvacseq/update_tiers.py
1
90.0
 0.0% pvactools/tools/pvacsplice/binding_filter.py
1
97.06
 -0.08% pvactools/tools/pvacsplice/coverage_filter.py
1
97.14
 0.17% pvactools/tools/pvacsplice/generate_aggregated_report.py
1
91.67
 0.0% pvactools/tools/pvacsplice/update_tiers.py
Jobs
ID Job ID Ran Files Coverage
1 26468932085.1 145
82.5
 GitHub Action Run
2 26468932085.2 145
82.61
 GitHub Action Run
3 26468932085.3 145
82.61
 GitHub Action Run
Source Files on build 26468932085